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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA07G303310
Reference: TK1151 Chr: Chr07 Coordinates: 76130479-76132696 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2157 bp · TkA07G303310|TK1151|cDNA

TATTTATGTAGTTCTATAAACTCTTAGATTATTAGACCAAAACACCTATTTCGGCGAAAAACGAATCCAACAATACAATTCTCCTCAAATCTGAGCTGGTATCCGGTGATAAATTAACCCCAACCAAATTTCCGTCGGGACCACGGCGGCGGCGACGGCGTCTAGCGGTGCGACGTAAGGTACGCCCTGTGTTGATCCAGATCTCGTTCATTTCTCTCCGATCTGTCTGCTCTATATTCCGTTGTGTCATAAAAATCATT...

CDS

Download CDS FASTA

1485 bp · TkA07G303310|TK1151|CDS

ATGAATTCGAATTACGGAAGATCAACTCAATCGGGATCTCTCAACAACTTTGATTTCGATCTCGGAATCAATTCGAATCGTTCCAAACCTCTCAATGCTCAGAACAACAACACTTACACGCAATCTAAGCCTAACACGACGACGCCGGCTTGGCAACCCAACAAACCTTCCTGGACGCACCAACCCGCCGCTCCTACACAGCCGTCCTCTTTGGCCGGGGCATTAAATGGACCGACATCAATGGTTGGAGACATCACGGG...

Protein

Download Protein FASTA

494 aa · TkA07G303310|TK1151|PROTEIN

MNSNYGRSTQSGSLNNFDFDLGINSNRSKPLNAQNNNTYTQSKPNTTTPAWQPNKPSWTHQPAAPTQPSSLAGALNGPTSMVGDITGRSWASSAPQRPSSTSNIGIANKNPNLFSDLLGSNLGAGKANSTNVPLKNVAPASSQTAPKSAYSMGGMADSLPKSGNTVNSGGSWGSSQGYGNYNTTGYANKNQNLGGPSLKSSTVSGIGAGMSSNSNKDPFGSLVDFSSKPASGMKAGTKSTPPTKPTDDVFGSFQNASKPN...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G303310
TK1151 IDTkA07G303310
OH-1004 IDLXL04_029328
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)99.600
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G303310
LocationChr07:76130479-76132696 (-)
DescriptionSimilar to spag1a: Sperm-associated antigen 1A
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_029328 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007338 single fertilization Biological Process
GO:0050821 protein stabilization Biological Process
GO:0070286 axonemal dynein complex assembly Biological Process
GO:0005654 nucleoplasm Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005829 cytosol Cellular Component
GO:0005929 cilium Cellular Component
GO:0097228 sperm principal piece Cellular Component
GO:0101031 protein folding chaperone complex Cellular Component
GO:0120293 dynein axonemal particle Cellular Component
GO:0005525 GTP binding Molecular Function
GO:0016787 hydrolase activity Molecular Function
KEGG gene cross-reference
hsa:6674
mmu:26942
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.519
Rank 1 · TkA07G303310 · TK1151
Golgi apparatus0.376
Rank 2 · TkA07G303310 · TK1151
Endoplasmic reticulum0.172
Rank 3 · TkA07G303310 · TK1151
Nucleus0.163
Rank 4 · TkA07G303310 · TK1151
Cell membrane0.064
Rank 5 · TkA07G303310 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00515TPR_1378-401 aa
PF13424TPR_12378-433 aa
PF07719TPR_2379-395 aa
PF13371TPR_9381-399 aa
PF13414TPR_11383-398 aa
PF14559TPR_19384-395 aa
PF13428TPR_14384-399 aa
PF12895ANAPC3387-464 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G303310PF00515TPR_13784018.9e-1038.7
TkA07G303310PF13424TPR_123784330.000421.2
TkA07G303310PF07719TPR_23793959.5e-0729.2
TkA07G303310PF13371TPR_93813990.002218.7
TkA07G303310PF13414TPR_113833980.1212.8
TkA07G303310PF14559TPR_193843950.1912.8
TkA07G303310PF13428TPR_143843990.213.2
TkA07G303310PF12895ANAPC33874640.2612.3
TkA07G303310PF07719TPR_24134449.5e-0729.2
TkA07G303310PF13431TPR_174134320.03115.2
TkA07G303310PF00515TPR_14144448.9e-1038.7
TkA07G303310PF13181TPR_84174400.0003621.2
TkA07G303310PF13428TPR_144174530.213.2
TkA07G303310PF13371TPR_94184410.002218.7
TkA07G303310PF13414TPR_114224570.1212.8
TkA07G303310PF13371TPR_94244870.002218.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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