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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA07G093360
Reference: TK1151 Chr: Chr07 Coordinates: 24317061-24324344 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

4266 bp · TkA07G093360|TK1151|cDNA

CTATAACCTAGTATAAAAATAATATACAAATAAAAGTTGAACTTTTCAATTTTTATTATTATATAAAACGTTAACTGTTACATTCTTAGTGATCATGGACACCAGTTCTAAACAGAACTAGAAAATAAACAAAAGAAAAACCATAAAATTCAATTTTTATGAATCAAATCTATAATTTATCCATTAGATATCTGCTTGGTTGTACATATGTTTATCGGCCGCTGGTAGGGTCTTGTTTTGCATTATTGAATCTTTTCCGT...

CDS

Download CDS FASTA

3828 bp · TkA07G093360|TK1151|CDS

ATGGCTTCCAGTTCCAGTTCTTTCTCTAGCAACATGGCTTCTACTAGTGCTCACGCTAGCACCTACGACGTTTTTCTAAGTTTTAGAGGCGAAGATACTCGCGATTCCTTTACGGATCATCTTTACCACGCGTTAAAGCGAGCAGGAATTGGTACTTTTAGGGATACCAAAGAAATCGAAAGAGGTGAAGAAGTGAAGCTGGAGATCGAAGGAGCAATTAAAGGATCTAGGGCTTCAATAGTTGTATTGTCGCCAAACTA...

Protein

Download Protein FASTA

1275 aa · TkA07G093360|TK1151|PROTEIN

MASSSSSFSSNMASTSAHASTYDVFLSFRGEDTRDSFTDHLYHALKRAGIGTFRDTKEIERGEEVKLEIEGAIKGSRASIVVLSPNYATSTWCLDELLLILKQRRECNHFVLPVFYHVDPSDLRKHNKTFAIEVIKADPRWTDDNVNRWKRALTEVADLAGVALSGPETECLKEIVDTIYNKLDRKDVHIPLTLTGLSTRYEDINSWLNQSNAEFLTICGMGGSGKTTLAKYIYDSNWKNFETMSFVEDIGRRCKESDDL...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G093360
TK1151 IDTkA07G093360
OH-1004 IDLXL04_028141
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)68.100
Protein coverage (%)TK1151 89.176 / OH-1004 60.179
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G093360
LocationChr07:24317061-24324344 (-)
DescriptionSimilar to EXO70E2: Exocyst complex component EXO70E2
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g19510 Disease resistance protein that cooperates with RPP2A to confer resistance to Hyaloperonospora parasitica isolate Cala2. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_028141 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006887 exocytosis Biological Process
GO:0006952 defense response Biological Process
GO:0006955 immune response Biological Process
GO:0007165 signal transduction Biological Process
GO:0009626 plant-type hypersensitive response Biological Process
GO:0015031 protein transport Biological Process
GO:0019677 NAD+ catabolic process Biological Process
GO:0043068 positive regulation of programmed cell death Biological Process
GO:0050832 defense response to fungus Biological Process
GO:0052542 defense response by callose deposition Biological Process
GO:1903533 regulation of protein targeting Biological Process
GO:1903553 positive regulation of extracellular exosome assembly Biological Process
KEGG gene cross-reference
ath:AT5G61010
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.395
Rank 1 · TkA07G093360 · TK1151
Nucleus0.344
Rank 2 · TkA07G093360 · TK1151
Cell membrane0.329
Rank 3 · TkA07G093360 · TK1151
Endoplasmic reticulum0.075
Rank 4 · TkA07G093360 · TK1151
Plastid0.053
Rank 5 · TkA07G093360 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF01582TIR22-186 aa
PF13676TIR_224-124 aa
PF00931NB-ARC201-369 aa
PF24883NPHP3_N202-237 aa
PF01637ATPase_2203-309 aa
PF20720nSTAND3205-250 aa
PF13401AAA_22211-305 aa
PF00005ABC_tran212-237 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G093360PF01582TIR221861.8e-43149.1
TkA07G093360PF13676TIR_2241244.1e-1866.7
TkA07G093360PF00931NB-ARC2013691.2e-2074.5
TkA07G093360PF24883NPHP3_N2022370.0001622.6
TkA07G093360PF01637ATPase_22033090.0001122.8
TkA07G093360PF20720nSTAND32052500.005817.1
TkA07G093360PF13401AAA_222113050.003518.4
TkA07G093360PF00005ABC_tran2122370.07914.3
TkA07G093360PF13173AAA_142143300.008416.8
TkA07G093360PF13238AAA_182172470.07914.2
TkA07G093360PF00005ABC_tran2793060.07914.3
TkA07G093360PF17377DUF53992873230.2511.8
TkA07G093360PF23282WHD_ROQ14425103.1e-1350.4
TkA07G093360PF13855LRR_85605940.006616.9
TkA07G093360PF23247LRR_RPS25605730.7310.5
TkA07G093360PF25019LRR_R13L1-DRL215615800.004117.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
F4JT80Arabidopsis thalianasp|F4JT80|RPP2B_ARATH Disease resistance protein RPP2B32.300%Swiss-ProtMedium

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