Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1142 bp · TkA07G044770|TK1151|cDNA
ACTCCTTCCTTTCTGCTTATATAAGCAGCTATAGTTCCACCATCTACCTCACACACAAAATAGAACTGAGAATCTTTCTCTCTCTTTGTGTGATTGTGTTCTTTGTAAGGTTCTCTGGGTGTTTTGTAATTAGGGTTTTGCTTCAATCTTAGGTTGTTTAATTGGTGAAAAACACCATGGAAACACAACAACAAGCAGATATACAAGATTTAGGGAACAAAAACAGTAGCACTTATGTATGCAGCAGGCAAAGCAGCACG...
873 bp · TkA07G044770|TK1151|CDS
ATGGAAACACAACAACAAGCAGATATACAAGATTTAGGGAACAAAAACAGTAGCACTTATGTATGCAGCAGGCAAAGCAGCACGAGGTGGACACCCACAAGTGACCAGATCAGAATTTTGAAAGAACTTTACTACAACAATGGAATCAGATCACCATCGGCTGATCAGATCCAGAGAATCGCTGCCCAGCTCAGACAGTACGGCAAGATTGAAGGCAAGAATGTGTTTTATTGGTTTCAGAACCATAAAGCTCGTGAAAG...
Protein
Download Protein FASTA290 aa · TkA07G044770|TK1151|PROTEIN
METQQQADIQDLGNKNSSTYVCSRQSSTRWTPTSDQIRILKELYYNNGIRSPSADQIQRIAAQLRQYGKIEGKNVFYWFQNHKARERQKKRFNPAPPPPPSPFSDHINHHLPTASPMQIQSHHHHYHHQEPPHVYTHPHKLYTTHHIGVGSSSVGCGYGSVAMEKSFRECSISPPGESRATGGIARNFGSRSRVGVDSFSFFDKIKSTRYEILENHHGEEDQEEGDTSPEIETLPLFPIHGGTHHDFFNMKAANLSSEHN...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA07G044770 |
|---|---|
| TK1151 ID | TkA07G044770 |
| OH-1004 ID | LXL04_024658 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 61.500 |
| Protein coverage (%) | TK1151 99.655 / OH-1004 99.644Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA07G044770 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr07:11892227-11893753 (+) | ||||||||||||
| Description | Similar to WUS: Protein WUSCHEL | ||||||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
Rice
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| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||||||||
| GO annotations (OH1004 source) | GO:0006351 DNA-templated transcription Biological Process GO:0006355 regulation of DNA-templated transcription Biological Process GO:0009908 flower development Biological Process GO:0019827 stem cell population maintenance Biological Process GO:0030154 cell differentiation Biological Process GO:0045892 negative regulation of DNA-templated transcription Biological Process GO:0048653 anther development Biological Process GO:0080166 stomium development Biological Process GO:0090506 axillary shoot meristem initiation Biological Process GO:0099402 plant organ development Biological Process GO:0005634 nucleus Cellular Component GO:0000976 transcription cis-regulatory region binding Molecular Function | ||||||||||||
| KEGG gene cross-reference | ath:AT2G17950 osa:107275471 sly:543793 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00046Homeodomain28-88 aaPF00046Homeodomain162-171 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA07G044770 | PF00046 | Homeodomain | 28 | 88 | 2.9e-14 | 53.3 |
| TkA07G044770 | PF00046 | Homeodomain | 162 | 171 | 2.9e-14 | 53.3 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.