Gene Card
Gene overview
cDNA / CDS / Protein Sequences
637 bp · TkA06G072000|TK1151|cDNA
GAAATCGTGCTAACACAAAAATGGCGGTTTTTCACACTCCTCCCATCGTCTCCATTTCTTCCACCGCATTCACGACTTCGCTGCTTCCCACAAATTTGGGTTCCCTACCCGTTTCCGGCTGCTTTATCCCGCCTTGTCTGTCGAAAATTCCATGTTTATTCCTTCTTAGAGCAACCCCGCTTCAGAAATACGTTTATCCAGACCCAATTCCTGAATTCGCTCTTCATGTGACAAAGAAGTTCCGAGAAGAGCTCAAGAAG...
495 bp · TkA06G072000|TK1151|CDS
ATGGCGGTTTTTCACACTCCTCCCATCGTCTCCATTTCTTCCACCGCATTCACGACTTCGCTGCTTCCCACAAATTTGGGTTCCCTACCCGTTTCCGGCTGCTTTATCCCGCCTTGTCTGTCGAAAATTCCATGTTTATTCCTTCTTAGAGCAACCCCGCTTCAGAAATACGTTTATCCAGACCCAATTCCTGAATTCGCTCTTCATGTGACAAAGAAGTTCCGAGAAGAGCTCAAGAAGAAACTCTACAAGGAAAGGGA...
Protein
Download Protein FASTA164 aa · TkA06G072000|TK1151|PROTEIN
MAVFHTPPIVSISSTAFTTSLLPTNLGSLPVSGCFIPPCLSKIPCLFLLRATPLQKYVYPDPIPEFALHVTKKFREELKKKLYKERDTFGDDLDRVLDTCTELFSEFVNKEYGGPGTLVMDPFTDMFTGLKQRKLPGANLAARASLLWAQNYLHHEWEIWNSKL
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA06G072000 |
|---|---|
| TK1151 ID | TkA06G072000 |
| OH-1004 ID | LXL04_025248 |
| Relationship / confidence | Sequence Supported Annotation Or Model Conflict / Review |
| Protein identity (%) | 98.800 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 20.865Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA06G072000 |
|---|---|
| Location | Chr06:19283995-19285294 (-) |
| Description | Similar to PRIN2: Protein PLASTID REDOX INSENSITIVE 2, chloroplastic |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006351 DNA-templated transcription Biological Process GO:0009642 response to light intensity Biological Process GO:0010468 regulation of gene expression Biological Process GO:0000427 plastid-encoded plastid RNA polymerase complex Cellular Component GO:0042644 chloroplast nucleoid Cellular Component GO:0042646 plastid nucleoid Cellular Component GO:0003677 DNA binding Molecular Function |
| KEGG gene cross-reference | ath:AT1G10522 dosa:Os09g0382400 zma:100278908 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.