Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2062 bp · TkA05G452380|TK1151|cDNA
ATTTATCCAACCCAAAAATAAGATATTTTCCTTATAAATAAGTTTCAAACATTTGCGCTGAAGGGACATACAAGCCGAAAGCTTCTTTCTTCCCTCTCTTCCATTAGTCTCATCAAGATCATGGATCCCTACAAGGAATCGAAACTCATCCTCCCTCCCCCTGATCAACGCCCTTCAAGTGCTTACAATACCCCATTCTGCACAACAAACGCCGGTTTACCGGTGTACAACAATACTGCATCCCTGACTGTTGGAAACAG...
1509 bp · TkA05G452380|TK1151|CDS
ATGGATCCCTACAAGGAATCGAAACTCATCCTCCCTCCCCCTGATCAACGCCCTTCAAGTGCTTACAATACCCCATTCTGCACAACAAACGCCGGTTTACCGGTGTACAACAATACTGCATCCCTGACTGTTGGAAACAGAGGGCCGATTCTACTTGAGGATTATCATCTGATTGAAAAACTAGCAAACTTCACTCGTGAACGTATCCCAGAACGTATAGTCCACGCGAGGGGTGCCAGTGCAAAGGGATTCTTCGAGGT...
Protein
Download Protein FASTA502 aa · TkA05G452380|TK1151|PROTEIN
MDPYKESKLILPPPDQRPSSAYNTPFCTTNAGLPVYNNTASLTVGNRGPILLEDYHLIEKLANFTRERIPERIVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPTIVRFSTVIHERGSPETIRDPRGFATKFYTREGNFDIVGNNFPVFFTRDAMAFPDVIHAFKPNPKSHIQEDWRILDFLSHHPESLNTMTFWLDDLGIPTDYRHMEGSSVNTLTLVNKEGKTHYVKFTWKPTCGVKCLMDDEAIKIGGANHSH...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA05G452380 |
|---|---|
| TK1151 ID | TkA05G452380 |
| OH-1004 ID | LXL04_022233 |
| Relationship / confidence | Sequence Supported Annotation Or Model Conflict / Review |
| Protein identity (%) | 99.800 |
| Protein coverage (%) | TK1151 99.004 / OH-1004 48.441Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA05G452380 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr05:113233299-113237811 (+) | |||||||||
| Description | Similar to Catalase | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. Rice
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| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006979 response to oxidative stress Biological Process GO:0009845 seed germination Biological Process GO:0042542 response to hydrogen peroxide Biological Process GO:0042744 hydrogen peroxide catabolic process Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005777 peroxisome Cellular Component GO:0005782 peroxisomal matrix Cellular Component GO:0005829 cytosol Cellular Component GO:0005886 plasma membrane Cellular Component GO:0009514 glyoxysome Cellular Component GO:0004096 catalase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ghi:107922122 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00199Catalase28-407 aaPF06628Catalase-rel435-496 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA05G452380 | PF00199 | Catalase | 28 | 407 | 3.5e-166 | 553.7 |
| TkA05G452380 | PF06628 | Catalase-rel | 435 | 496 | 6.5e-14 | 52.6 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.