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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA05G433560
Reference: TK1151 Chr: Chr05 Coordinates: 108207267-108218526 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1787 bp · TkA05G433560|TK1151|cDNA

ATAAAAGCCCTATACAACCACAAAAAAAACATAAAACACTTTGAAAACAAAGCATGTGTAAAGAGAGTTTTAAGAGGTTATATGTTCGTACCAAGCCTTTTATACTCATGATCCTCTTGCAAACTTCGTATGCTGTTAATGGTTTAGTTGTCAAGTCAGCCCTAAACAAGGGCTTAAATCATTATACTTTCGCTGTATACCGAAACGCTATTGCAGCTCTCTTCTTTGCTCCTTTCGCTTTCTTCCTTGAAAGGAAAGTA...

CDS

Download CDS FASTA

1140 bp · TkA05G433560|TK1151|CDS

ATGTGTAAAGAGAGTTTTAAGAGGTTATATGTTCGTACCAAGCCTTTTATACTCATGATCCTCTTGCAAACTTCGTATGCTGTTAATGGTTTAGTTGTCAAGTCAGCCCTAAACAAGGGCTTAAATCATTATACTTTCGCTGTATACCGAAACGCTATTGCAGCTCTCTTCTTTGCTCCTTTCGCTTTCTTCCTTGAAAGGAAAGTAAATAGGCCAGCAATGAAAGTCTCCATCTTCCTGAAGATCATGTTACTAGGATT...

Protein

Download Protein FASTA

379 aa · TkA05G433560|TK1151|PROTEIN

MCKESFKRLYVRTKPFILMILLQTSYAVNGLVVKSALNKGLNHYTFAVYRNAIAALFFAPFAFFLERKVNRPAMKVSIFLKIMLLGLLEPVIDQNLFYAGMKFTTATFATSMCNIVPAIAFVMAWIFRLEKVNIRSFHSQGKIIGTIVTIGGAMIMTFIRGPSFQFPWAHHHTLHHQSTIATMSTQDQIKGSLMITVGCFCWASFVILQAVTLKSYTASLSLTTLICMMGALEGSILTLVAENGNASVWAVNWDIKLFAA...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA05G433560
TK1151 IDTkA05G433560
OH-1004 IDLXL04_021962
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)93.400
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA05G433560
LocationChr05:108207267-108218526 (+)
DescriptionSimilar to At2g39510: WAT1-related protein At2g39510
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g39510 WAT1-related protein At2g39510. No verified direct reference in this release
At2g37460 WAT1-related protein At2g37460. No verified direct reference in this release
At5g13670 WAT1-related protein At5g13670. No verified direct reference in this release
At4g08290 WAT1-related protein At4g08290. No verified direct reference in this release
At2g37450 WAT1-related protein At2g37450. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_021962 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0009620 response to fungus Biological Process
GO:0048316 seed development Biological Process
GO:0098712 L-glutamate import across plasma membrane Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005739 mitochondrion Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0015186 L-glutamine transmembrane transporter activity Molecular Function
GO:0022857 transmembrane transporter activity Molecular Function
KEGG gene cross-reference
ath:AT1G21890
ath:AT2G37460
ath:AT2G39510
ath:AT4G08290
ath:AT5G13670
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.488
Rank 1 · TkA05G433560 · TK1151
Lysosome / Vacuole0.189
Rank 2 · TkA05G433560 · TK1151
Endoplasmic reticulum0.177
Rank 3 · TkA05G433560 · TK1151
Cytoplasm0.074
Rank 4 · TkA05G433560 · TK1151
Golgi apparatus0.072
Rank 5 · TkA05G433560 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF17591UL41A6-18 aa
PF00892EamA16-156 aa
PF05653Mg_trans_NIPA35-49 aa
PF05653Mg_trans_NIPA86-162 aa
PF19360TadB_TadC_N101-126 aa
PF04226Transgly_assoc120-159 aa
PF00892EamA190-329 aa
PF17591UL41A193-217 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA05G433560PF17591UL41A6180.1812.6
TkA05G433560PF00892EamA161561.1e-2694.5
TkA05G433560PF05653Mg_trans_NIPA35490.0003220.7
TkA05G433560PF05653Mg_trans_NIPA861620.0003220.7
TkA05G433560PF19360TadB_TadC_N1011260.6710.5
TkA05G433560PF04226Transgly_assoc1201591.59.9
TkA05G433560PF00892EamA1903291.1e-2694.5
TkA05G433560PF17591UL41A1932170.1812.6
TkA05G433560PF19360TadB_TadC_N2012190.6710.5
TkA05G433560PF04226Transgly_assoc2763061.59.9
TkA05G433560PF05653Mg_trans_NIPA2853380.0003220.7
TkA05G433560PF04226Transgly_assoc3123241.59.9
TkA05G433560PF19360TadB_TadC_N3143440.6710.5
TkA05G433560PF28880T2SSM_N3153560.07213.9
TkA05G433560PF17591UL41A3153600.1812.6

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
O80638Arabidopsis thalianasp|O80638|WTR14_ARATH WAT1-related protein At2g3951053.000%Swiss-ProtHigh
Q9ZUS1Arabidopsis thalianasp|Q9ZUS1|WTR13_ARATH WAT1-related protein At2g3746056.000%Swiss-ProtHigh
Q9FNA5Arabidopsis thalianasp|Q9FNA5|WTR39_ARATH WAT1-related protein At5g1367048.600%Swiss-ProtMedium
Q9SUF1Arabidopsis thalianasp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g0829043.500%Swiss-ProtMedium
F4IQX1Arabidopsis thalianasp|F4IQX1|WTR12_ARATH WAT1-related protein At2g3745048.400%Swiss-ProtMedium

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