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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA05G154820
Reference: TK1151 Chr: Chr05 Coordinates: 40092973-40095265 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

843 bp · TkA05G154820|TK1151|cDNA

ATGCTCTATCTATTCTCGAATTCAAATCCAAAGCCGATCTCCATAACAAGCTTCCCTATTCCGTTAAAACGAGCTCCACTCACTGGACCCATATCTGATCTCGTCGGACTCGTTAACCTCAAAACGCTGTTTCTGGACCACAACTCCTTCACTGGTGACATCCCCCCCTCGATCTCTTCCCTTCATCGACTTCGAACCCTGGATCTCTCATACAACAGATTATCCGATGTTATTCCTGTTGGTTTTGCCAGTTTAGACCG...

CDS

Download CDS FASTA

843 bp · TkA05G154820|TK1151|CDS

ATGCTCTATCTATTCTCGAATTCAAATCCAAAGCCGATCTCCATAACAAGCTTCCCTATTCCGTTAAAACGAGCTCCACTCACTGGACCCATATCTGATCTCGTCGGACTCGTTAACCTCAAAACGCTGTTTCTGGACCACAACTCCTTCACTGGTGACATCCCCCCCTCGATCTCTTCCCTTCATCGACTTCGAACCCTGGATCTCTCATACAACAGATTATCCGATGTTATTCCTGTTGGTTTTGCCAGTTTAGACCG...

Protein

Download Protein FASTA

280 aa · TkA05G154820|TK1151|PROTEIN

MLYLFSNSNPKPISITSFPIPLKRAPLTGPISDLVGLVNLKTLFLDHNSFTGDIPPSISSLHRLRTLDLSYNRLSDVIPVGFASLDRLNYLRLDSNSFSASLHRLAFFAQTGEKQPKCLRSLCVGRDPITDMFMDPTMGISNGIRAVGPEEGMSWKNRFDSRMEEMRQNHAELFKMMEESLKKMDRILEMERLLTENERDEAKTPSEENPMVNEGLEVPHSSMIEMHHQNKKKNQPSNIEQKEVNQDLSVSPVPSMAFPL...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA05G154820
TK1151 IDTkA05G154820
OH-1004 IDLXL04_016882
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)85.900
Protein coverage (%)TK1151 50.714 / OH-1004 19.586
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA05G154820
LocationChr05:40092973-40095265 (-)
DescriptionSimilar to HSP81-3: Heat shock protein 81-3
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g67200 Probable inactive receptor kinase At5g67200. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_016882 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006457 protein folding Biological Process
GO:0034605 cellular response to heat Biological Process
GO:0050821 protein stabilization Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005829 cytosol Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0032991 protein-containing complex Cellular Component
GO:0048471 perinuclear region of cytoplasm Cellular Component
GO:0005524 ATP binding Molecular Function
GO:0016887 ATP hydrolysis activity Molecular Function
GO:0051082 unfolded protein binding Molecular Function
GO:0140662 ATP-dependent protein folding chaperone Molecular Function
KEGG gene cross-reference
dosa:Os08g0500700
dosa:Os09g0482100
ini:109146489
osa:9267802
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.466
Rank 1 · TkA05G154820 · TK1151
Cytoplasm0.383
Rank 2 · TkA05G154820 · TK1151
Cell membrane0.129
Rank 3 · TkA05G154820 · TK1151
Endoplasmic reticulum0.086
Rank 4 · TkA05G154820 · TK1151
Mitochondrion0.065
Rank 5 · TkA05G154820 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00560LRR_12-9 aa
PF23598LRR_1432-96 aa
PF12799LRR_439-77 aa
PF13855LRR_839-97 aa
PF00560LRR_139-61 aa
PF07723LRR_239-53 aa
PF13516LRR_639-52 aa
PF12799LRR_463-97 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA05G154820PF00560LRR_1291.9e-0936.5
TkA05G154820PF23598LRR_1432963.9e-0626.6
TkA05G154820PF12799LRR_439771e-1145.4
TkA05G154820PF13855LRR_839971.4e-1144.7
TkA05G154820PF00560LRR_139611.9e-0936.5
TkA05G154820PF07723LRR_239530.002818.9
TkA05G154820PF13516LRR_639520.810.6
TkA05G154820PF12799LRR_463971e-1145.4
TkA05G154820PF00560LRR_163851.9e-0936.5
TkA05G154820PF07723LRR_263760.002818.9
TkA05G154820PF13516LRR_664770.810.6
TkA05G154820PF00560LRR_1881001.9e-0936.5
TkA05G154820PF13516LRR_688960.810.6
TkA05G154820PF07723LRR_2911050.002818.9
TkA05G154820PF12799LRR_41181311e-1145.4
TkA05G154820PF17242DUF53151571820.05614.0

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q93Y06Arabidopsis thalianasp|Q93Y06|Y5720_ARATH Probable inactive receptor kinase At5g6720061.900%Swiss-ProtLow

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