Gene Card
Gene overview
cDNA / CDS / Protein Sequences
972 bp · TkA05G003660|TK1151|cDNA
ATGGGTAAACTCAGTCTCCAAGGGAACACTTGTCAAAACCTCAGTGGACCACGTAGATATCTGACAAGACAAATGGTAAAATGTCAGGCAGAAGATGTTTTCCATGTCTCCGCCTCTCCCCATCTGCTCCTCGCACACAGTACACACAGTGAACACAGCGATCAATTGCTCCGACTCTCAGCGACACGCAGCTCCGACTCGCCTCCCGTGACTTCGCCTTCCCCAACCTCGGCTCGGGTTCTCCGTTCTCCTCTGATTGT...
972 bp · TkA05G003660|TK1151|CDS
ATGGGTAAACTCAGTCTCCAAGGGAACACTTGTCAAAACCTCAGTGGACCACGTAGATATCTGACAAGACAAATGGTAAAATGTCAGGCAGAAGATGTTTTCCATGTCTCCGCCTCTCCCCATCTGCTCCTCGCACACAGTACACACAGTGAACACAGCGATCAATTGCTCCGACTCTCAGCGACACGCAGCTCCGACTCGCCTCCCGTGACTTCGCCTTCCCCAACCTCGGCTCGGGTTCTCCGTTCTCCTCTGATTGT...
Protein
Download Protein FASTA323 aa · TkA05G003660|TK1151|PROTEIN
MGKLSLQGNTCQNLSGPRRYLTRQMVKCQAEDVFHVSASPHLLLAHSTHSEHSDQLLRLSATRSSDSPPVTSPSPTSARVLRSPLIVEESASHTATHSEHSDTQSPPCSAIASLLRRPLPAPTSPPCSAPLSRRTTTGGNLHQSVNQNLHLSPTYVKPCDNRTLMDVDHDELDVSPVNIIRNSEQVEDISTPLRSSQPASDDGLEVIDICSSPLASEEAAAVPCSSSNMCYTMQFSFEELKKRRHQKLSAFQARKKKSQV...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA05G003660 |
|---|---|
| TK1151 ID | TkA05G003660 |
| OH-1004 ID | LXL04_018902 |
| Relationship / confidence | Rbh Below Probable Coverage Or Synteny Threshold / Review |
| Protein identity (%) | 71.100 |
| Protein coverage (%) | TK1151 98.762 / OH-1004 98.187Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA05G003660 |
|---|---|
| Location | Chr05:1091352-1093755 (-) |
| Description | Similar to PMS1: DNA mismatch repair protein PMS1 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006298 mismatch repair Biological Process GO:0006310 DNA recombination Biological Process GO:0009555 pollen development Biological Process GO:0010154 fruit development Biological Process GO:0048316 seed development Biological Process GO:0005634 nucleus Cellular Component GO:0032389 MutLalpha complex Cellular Component GO:0005524 ATP binding Molecular Function GO:0016887 ATP hydrolysis activity Molecular Function GO:0030983 mismatched DNA binding Molecular Function GO:0140664 ATP-dependent DNA damage sensor activity Molecular Function |
| KEGG gene cross-reference | ath:AT4G02460 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.