Gene Card
Gene overview
cDNA / CDS / Protein Sequences
630 bp · TkA04G436100|TK1151|cDNA
ATGAAGGACGGGATCTGGCAGACCGACCCGAATCAGGAAAGATTTAAACAGACCCAAGAAGAAGGATGGGATCAGAATTTTGCAGGTATCAAACAGCTGTCAGAAGACCAAAAGGTCACAGTTGGAGACGGAGAGGACACCCGATTCTGGATAGACAAATGGCAAGCGATAGGGAACTTCAAAACAGCTTTTCCTCGCATGTATGCACTTGAGTCAGAAAAAGACGTTAAAGTTAAAGATCGTTTAAACAACAATTTGGA...
630 bp · TkA04G436100|TK1151|CDS
ATGAAGGACGGGATCTGGCAGACCGACCCGAATCAGGAAAGATTTAAACAGACCCAAGAAGAAGGATGGGATCAGAATTTTGCAGGTATCAAACAGCTGTCAGAAGACCAAAAGGTCACAGTTGGAGACGGAGAGGACACCCGATTCTGGATAGACAAATGGCAAGCGATAGGGAACTTCAAAACAGCTTTTCCTCGCATGTATGCACTTGAGTCAGAAAAAGACGTTAAAGTTAAAGATCGTTTAAACAACAATTTGGA...
Protein
Download Protein FASTA209 aa · TkA04G436100|TK1151|PROTEIN
MKDGIWQTDPNQERFKQTQEEGWDQNFAGIKQLSEDQKVTVGDGEDTRFWIDKWQAIGNFKTAFPRMYALESEKDVKVKDRLNNNLESWARRRAIRDGREREEACRMEEVLRDQALSIKKDKWTVYGAPNGVYTTEWLRECLKSFKTSEDVFLWSRSKQKSEKEGLKFQVAIAAVFVTIWRARNRLIFDNKKMVLEIEFRNAQELAFFC
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA04G436100 |
|---|---|
| TK1151 ID | TkA04G436100 |
| OH-1004 ID | LXL04_035339 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 39.600 |
| Protein coverage (%) | TK1151 81.340 / OH-1004 15.453Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA04G436100 |
|---|---|
| Location | Chr04:109961479-109970012 (+) |
| Description | Similar to At5g07670: F-box protein At5g07670 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process Biological Process GO:0005576 extracellular region Cellular Component GO:0005737 cytoplasm Cellular Component GO:0019005 SCF ubiquitin ligase complex Cellular Component GO:0005524 ATP binding Molecular Function GO:0016301 kinase activity Molecular Function GO:0016774 phosphotransferase activity, carboxyl group as acceptor Molecular Function |
| KEGG gene cross-reference | ath:AT5G07670 ath:AT5G51370 ath:AT5G51380 pfu:PF0078 pho:PH0149 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.