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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA04G285480
Reference: TK1151 Chr: Chr04 Coordinates: 71852954-71853445 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

348 bp · TkA04G285480|TK1151|cDNA

CTTTTAGTTGTTTGGTTTTTCGTCTTTTTCCGTAAAAAGATTGCTCGTTTAGTCGGGTGTGCCCATCTTGGAACTCACGCTTATTCCACGAGTGTTGAGGGAGATATCATCTCAAAAATCGGTCTTGTTAGTTATCTCCTAATAACTAACATCGGTTCAAATCCGAATCTTTTACTTGTTTGGTTTTACATCTTTTTCCATAAAAAGATGGTTTTCAAGCTACATCAGGGGCTTGAAATTAGAAAAATGTTCCGATCAAT...

348 bp · TkA04G285480|TK1151|CDS

CTTTTAGTTGTTTGGTTTTTCGTCTTTTTCCGTAAAAAGATTGCTCGTTTAGTCGGGTGTGCCCATCTTGGAACTCACGCTTATTCCACGAGTGTTGAGGGAGATATCATCTCAAAAATCGGTCTTGTTAGTTATCTCCTAATAACTAACATCGGTTCAAATCCGAATCTTTTACTTGTTTGGTTTTACATCTTTTTCCATAAAAAGATGGTTTTCAAGCTACATCAGGGGCTTGAAATTAGAAAAATGTTCCGATCAAT...

115 aa · TkA04G285480|TK1151|PROTEIN

LLVVWFFVFFRKKIARLVGCAHLGTHAYSTSVEGDIISKIGLVSYLLITNIGSNPNLLLVWFYIFFHKKMVFKLHQGLEIRKMFRSITHNKDFLYENEDLLPLGVTSRTFAKVST

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA04G285480
TK1151 IDTkA04G285480
OH-1004 IDLXL04_025605
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)83.800
Protein coverage (%)TK1151 28.696 / OH-1004 4.229
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA04G285480
LocationChr04:71852954-71853445 (-)
DescriptionSimilar to HSP70-17: Heat shock 70 kDa protein 17
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_025605 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006950 response to stress Biological Process
GO:0030968 endoplasmic reticulum unfolded protein response Biological Process
GO:0000325 plant-type vacuole Cellular Component
GO:0005783 endoplasmic reticulum Cellular Component
GO:0005788 endoplasmic reticulum lumen Cellular Component
GO:0005794 Golgi apparatus Cellular Component
GO:0005829 cytosol Cellular Component
GO:0034663 endoplasmic reticulum chaperone complex Cellular Component
GO:0099503 secretory vesicle Cellular Component
GO:0000774 adenyl-nucleotide exchange factor activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0016887 ATP hydrolysis activity Molecular Function
KEGG gene cross-reference
ath:AT4G16660
ddi:DDB_G0273093
ddi:DDB_G0273813
dre:327133
xtr:779444
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.413
Rank 1 · TkA04G285480 · TK1151
Nucleus0.280
Rank 2 · TkA04G285480 · TK1151
Mitochondrion0.199
Rank 3 · TkA04G285480 · TK1151
Cell membrane0.116
Rank 4 · TkA04G285480 · TK1151
Endoplasmic reticulum0.108
Rank 5 · TkA04G285480 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

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