Gene Card
Gene overview
cDNA / CDS / Protein Sequences
768 bp · TkA04G018050|TK1151|cDNA
ATGGCATATTTCAAAGCTAAAACCTTTCCTTTTATTCTTCTAGCTCTTCTTCTTCTTCTTCCATGTGTAATTTGTTCATCATCTCAAGAACATATCAAAGAAGACAGGCTTAATGATCATCACGAAGTTGTCCAGTCAATCAGCCCAAGATTGTCATTACAGATAGTTATACATGGGTTTCTCCTTTGGGCTTCCATGGGTTTCTTGATTCCCGTTGGAATCTTGGCCATTAGATTGTCAAACAGAGAGGAAAGTCAAAG...
768 bp · TkA04G018050|TK1151|CDS
ATGGCATATTTCAAAGCTAAAACCTTTCCTTTTATTCTTCTAGCTCTTCTTCTTCTTCTTCCATGTGTAATTTGTTCATCATCTCAAGAACATATCAAAGAAGACAGGCTTAATGATCATCACGAAGTTGTCCAGTCAATCAGCCCAAGATTGTCATTACAGATAGTTATACATGGGTTTCTCCTTTGGGCTTCCATGGGTTTCTTGATTCCCGTTGGAATCTTGGCCATTAGATTGTCAAACAGAGAGGAAAGTCAAAG...
Protein
Download Protein FASTA255 aa · TkA04G018050|TK1151|PROTEIN
MAYFKAKTFPFILLALLLLLPCVICSSSQEHIKEDRLNDHHEVVQSISPRLSLQIVIHGFLLWASMGFLIPVGILAIRLSNREESQRKLRIMFCIHAITQAMQILSVILVTAGAILSIKNFSNTFDNMHRRIGVALYGLVLLQALTGLLRPARGVKGRSLWYFSHWSLGITISLLGIIGVYTGLQAYQKRISRNIQPWVMFYTAEIVCIGFVYLFQEKWEYIQKQGVVPGNHESTTIVELANNRDILSSPNKDSC
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA04G018050 |
|---|---|
| TK1151 ID | TkA04G018050 |
| OH-1004 ID | LXL04_036899 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 96.900 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA04G018050 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr04:4538739-4540144 (-) | |||||||||
| Description | Similar to At4g18260: Cytochrome b561 domain-containing protein At4g18260 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0005576 extracellular region Cellular Component GO:0005789 endoplasmic reticulum membrane Cellular Component GO:0005829 cytosol Cellular Component GO:0009507 chloroplast Cellular Component GO:0016020 membrane Cellular Component GO:0016491 oxidoreductase activity Molecular Function GO:0046872 metal ion binding Molecular Function GO:0140575 transmembrane monodehydroascorbate reductase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT2G30890 ath:AT4G12980 ath:AT4G17280 ath:AT4G18260 ath:AT5G47530 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF07331TctB5-97 aaPF10067DUF23067-44 aaPF27339Prd_NiFe_hyd_3_EhaK13-19 aaPF04103CD2047-129 aaPF13301DUF407956-189 aaPF03188Cytochrom_B56157-185 aaPF05241EBP60-121 aaPF03929PepSY_TM70-149 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA04G018050 | PF07331 | TctB | 5 | 97 | 0.0075 | 17.1 |
| TkA04G018050 | PF10067 | DUF2306 | 7 | 44 | 0.0046 | 17.8 |
| TkA04G018050 | PF27339 | Prd_NiFe_hyd_3_EhaK | 13 | 19 | 0.35 | 11.7 |
| TkA04G018050 | PF04103 | CD20 | 47 | 129 | 0.1 | 13.3 |
| TkA04G018050 | PF13301 | DUF4079 | 56 | 189 | 0.00024 | 22.1 |
| TkA04G018050 | PF03188 | Cytochrom_B561 | 57 | 185 | 9e-08 | 33.2 |
| TkA04G018050 | PF05241 | EBP | 60 | 121 | 1.6 | 9.8 |
| TkA04G018050 | PF03929 | PepSY_TM | 70 | 149 | 9.6 | 6.6 |
| TkA04G018050 | PF07314 | Lit | 72 | 130 | 2.1 | 9.1 |
| TkA04G018050 | PF27339 | Prd_NiFe_hyd_3_EhaK | 91 | 110 | 0.35 | 11.7 |
| TkA04G018050 | PF10348 | DUF2427 | 98 | 149 | 2.3 | 8.7 |
| TkA04G018050 | PF27339 | Prd_NiFe_hyd_3_EhaK | 99 | 115 | 0.35 | 11.7 |
| TkA04G018050 | PF10067 | DUF2306 | 105 | 189 | 0.0046 | 17.8 |
| TkA04G018050 | PF07331 | TctB | 105 | 215 | 0.0075 | 17.1 |
| TkA04G018050 | PF03929 | PepSY_TM | 156 | 185 | 9.6 | 6.6 |
| TkA04G018050 | PF10348 | DUF2427 | 158 | 212 | 2.3 | 8.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.