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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA03G519360
Reference: TK1151 Chr: Chr03 Coordinates: 130309510-130309950 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

441 bp · TkA03G519360|TK1151|cDNA

ATGAGGAATCAGTCAAAGGTTCCATCCTCTTCTTCGTCTTCCACCCGAGGGCTTCGAGAAAAGCTCAAGACCCACCCAATCAGCAGTTGCCAGGGGAAAACCAACATCGAGAGAGGGAGAAATCGACGGGGCAAATCCAAGACGGAGGAGGCGAAATCAGCAGGACGCACGCGGGAAGGAGAAGGAGTCGCCGGCGGTCTGGTTGGAGCCCCATGCTTTAACCTCACCCTTGTAACCCTTGCCATGACCGGCTATTGTTG...

441 bp · TkA03G519360|TK1151|CDS

ATGAGGAATCAGTCAAAGGTTCCATCCTCTTCTTCGTCTTCCACCCGAGGGCTTCGAGAAAAGCTCAAGACCCACCCAATCAGCAGTTGCCAGGGGAAAACCAACATCGAGAGAGGGAGAAATCGACGGGGCAAATCCAAGACGGAGGAGGCGAAATCAGCAGGACGCACGCGGGAAGGAGAAGGAGTCGCCGGCGGTCTGGTTGGAGCCCCATGCTTTAACCTCACCCTTGTAACCCTTGCCATGACCGGCTATTGTTG...

146 aa · TkA03G519360|TK1151|PROTEIN

MRNQSKVPSSSSSSTRGLREKLKTHPISSCQGKTNIERGRNRRGKSKTEEAKSAGRTREGEGVAGGLVGAPCFNLTLVTLAMTGYCWSPIAGDRRTACARRRRILDHSGVVCTETRVLERVLSATVSCIFSGTDCISGKRRSRIRL

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA03G519360
TK1151 IDTkA03G519360
OH-1004 IDLXL04_015601
Relationship / confidenceSequence Supported Annotation Or Model Conflict / Review
Protein identity (%)99.300
Protein coverage (%)TK1151 95.205 / OH-1004 40.407
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G519360
LocationChr03:130309510-130309950 (+)
DescriptionSimilar to At5g25040: Probable folate-biopterin transporter 5
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_015601 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0098838 folate transmembrane transport Biological Process
GO:0005634 nucleus Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0009536 plastid Cellular Component
GO:0016020 membrane Cellular Component
GO:0008517 folic acid transmembrane transporter activity Molecular Function
KEGG gene cross-reference
ath:AT1G79710
ath:AT5G10820
ath:AT5G25040
ath:AT5G25050
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.512
Rank 1 · TkA03G519360 · TK1151
Cytoplasm0.341
Rank 2 · TkA03G519360 · TK1151
Mitochondrion0.109
Rank 3 · TkA03G519360 · TK1151
Cell membrane0.086
Rank 4 · TkA03G519360 · TK1151
Endoplasmic reticulum0.042
Rank 5 · TkA03G519360 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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