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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA03G449620
Reference: TK1151 Chr: Chr03 Coordinates: 112144671-112152423 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2520 bp · TkA03G449620|TK1151|cDNA

TTGATTCGTACACGACAACTTTAACAATTTATGTTTTAAAACTTGTATTATACAATATTTTAAAACATAAATTGTTGTGTCCAATTAGAAACCGTACAAATCACTTCCCATTAAGAAAGGTTCATATGGTTAATTCGTTACATAGCCATTTAATTGAGACTTTAAACGATACCATTGTGAAGCTCAAAGGAACGAAGGGAAACGGAAACAGAAGACATATATAAAGTTTCAACCGAAAGAATAACAGAAGATATGGACAT...

CDS

Download CDS FASTA

1149 bp · TkA03G449620|TK1151|CDS

ATGCTTCATATAGCAGTTGGATTATATCGTAACAATTTAGTCAGAGAAATATTACACTTCATAGAAGGAGAAAATTTACCTAAAATGATAAATATGGATGGAAGCACATCCCTTCACATTGCTGCAATTGTTGGCAACAAATCTGCAGCAGAGCTCTTGGTTAAAAAAAACGGAAGTTTGTTGGAAATATTGGATCATAAACGTGAAACACCTTTGGATAAAGCTTATGAAAATATGCATCTTGGTACCATTGAATATTT...

Protein

Download Protein FASTA

382 aa · TkA03G449620|TK1151|PROTEIN

MLHIAVGLYRNNLVREILHFIEGENLPKMINMDGSTSLHIAAIVGNKSAAELLVKKNGSLLEILDHKRETPLDKAYENMHLGTIEYLLKAMSDGIKISKKKDSLNPGVNIGVNLLVNAISARQYDLATQFLKEFPEFSVENDNVLMAIARTFPDGLDYGETLLYPNAEYIFKRIVIIAKNSYKILIQYGSILIEMLHDPHHSMSMKITWLVILIIITVPIMVVIWILNWVALFIWMVYFLFSLIYFLLWKISTKLVAPIK...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA03G449620
TK1151 IDTkA03G449620
OH-1004 IDLXL04_028202
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)46.400
Protein coverage (%)TK1151 96.335 / OH-1004 44.118
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G449620
LocationChr03:112144671-112152423 (-)
DescriptionProtein of unknown function
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_028202 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006457 protein folding Biological Process
GO:0006654 phosphatidic acid biosynthetic process Biological Process
GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway Biological Process
GO:0031571 mitotic G1 DNA damage checkpoint signaling Biological Process
GO:0035556 intracellular signal transduction Biological Process
GO:0046339 diacylglycerol metabolic process Biological Process
GO:0046486 glycerolipid metabolic process Biological Process
GO:0046580 negative regulation of Ras protein signal transduction Biological Process
GO:0046834 lipid phosphorylation Biological Process
GO:0050860 negative regulation of T cell receptor signaling pathway Biological Process
GO:0070682 proteasome regulatory particle assembly Biological Process
GO:0099562 maintenance of postsynaptic density structure Biological Process
KEGG gene cross-reference
ath:AT5G02620
ddi:DDB_G0287345
rno:81821
spo:2542919
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.770
Rank 1 · TkA03G449620 · TK1151
Endoplasmic reticulum0.108
Rank 2 · TkA03G449620 · TK1151
Cytoplasm0.092
Rank 3 · TkA03G449620 · TK1151
Extracellular0.057
Rank 4 · TkA03G449620 · TK1151
Nucleus0.049
Rank 5 · TkA03G449620 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF13606Ank_31-19 aa
PF12796Ank_22-98 aa
PF00023Ank2-18 aa
PF13857Ank_52-11 aa
PF13637Ank_431-54 aa
PF00023Ank33-59 aa
PF13606Ank_333-58 aa
PF13857Ank_534-75 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA03G449620PF13606Ank_31191.1e-0526.1
TkA03G449620PF12796Ank_22982.4e-1351.2
TkA03G449620PF00023Ank2184.1e-0730.7
TkA03G449620PF13857Ank_52115.4e-0524.2
TkA03G449620PF13637Ank_431540.01216.7
TkA03G449620PF00023Ank33594.1e-0730.7
TkA03G449620PF13606Ank_333581.1e-0526.1
TkA03G449620PF13857Ank_534755.4e-0524.2
TkA03G449620PF13637Ank_438880.01216.7
TkA03G449620PF00023Ank69894.1e-0730.7
TkA03G449620PF13606Ank_369901.1e-0526.1
TkA03G449620PF12796Ank_21111512.4e-1351.2
TkA03G449620PF13857Ank_51111275.4e-0524.2
TkA03G449620PF13606Ank_31121321.1e-0526.1
TkA03G449620PF08820DUF18031221361.89.2
TkA03G449620PF13567DUF41312092640.1112.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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