Gene Card
Gene overview
cDNA / CDS / Protein Sequences
992 bp · TkA03G305890|TK1151|cDNA
ATTTCACTATAGGACATGTGTCCACCATCAACCGACGCCAAGCAAATTGCCGCATCCCTTCATTTTTCCACCATCGGAAAGCCTCCGTCAAAATTGAGATACGCCTCCGTCAACATCCCGTCATCTCCGTCTAAATGGCCACATCGGCTCCGTGAAGAACCCGGCAACACAAAGCTTTCATCCATTATCAACCGCTGGCTACTCTTAACGGATTTCGTCATCCACAGCCGTCGGCAACCGCAAGCCCTAACTCCCCATTC...
555 bp · TkA03G305890|TK1151|CDS
ATGTGTCCACCATCAACCGACGCCAAGCAAATTGCCGCATCCCTTCATTTTTCCACCATCGGAAAGCCTCCGTCAAAATTGAGATACGCCTCCGTCAACATCCCGTCATCTCCGTCTAAATGGCCACATCGGCTCCGTGAAGAACCCGGCAACACAAAGCTTTCATCCATTATCAACCGCTGGCTACTCTTAACGGATTTCGTCATCCACAGCCGTCGGCAACCGCAAGCCCTAACTCCCCATTCGACGATCCCCAATCG...
Protein
Download Protein FASTA184 aa · TkA03G305890|TK1151|PROTEIN
MCPPSTDAKQIAASLHFSTIGKPPSKLRYASVNIPSSPSKWPHRLREEPGNTKLSSIINRWLLLTDFVIHSRRQPQALTPHSTIPNRHHLPLRRLQFQPIATITEYRRSRKASNKPDLIELLNRESCKYVDELLPYPDETDILPNAIAREMMKAVNLITWKAYLGERKLEFTSTRKKLFNYRMC
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA03G305890 |
|---|---|
| TK1151 ID | TkA03G305890 |
| OH-1004 ID | LXL04_011796 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 78.200 |
| Protein coverage (%) | TK1151 85.326 / OH-1004 42.889Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA03G305890 |
|---|---|
| Location | Chr03:75219239-75221540 (+) |
| Description | Similar to Os03g0255100: Beta-galactosidase 6 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0005975 carbohydrate metabolic process Biological Process GO:0009827 plant-type cell wall modification Biological Process GO:0010345 suberin biosynthetic process Biological Process GO:0019388 galactose catabolic process Biological Process GO:0005576 extracellular region Cellular Component GO:0005773 vacuole Cellular Component GO:0005886 plasma membrane Cellular Component GO:0009505 plant-type cell wall Cellular Component GO:0048046 apoplast Cellular Component GO:0004565 beta-galactosidase activity Molecular Function GO:0030246 carbohydrate binding Molecular Function |
| KEGG gene cross-reference | ath:AT2G28470 ath:AT4G36360 dosa:Os03g0165400 dosa:Os03g0255100 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.