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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA03G201100
Reference: TK1151 Chr: Chr03 Coordinates: 50515143-50521316 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

3456 bp · TkA03G201100|TK1151|cDNA

TCACTTCTTTTTTCAGCTCTGAAAAATTCAAAGTTAAAACATTTTGGAGGGATAAAACCAAGGGCGGCAAACCAGTGCCATAGCCGGCCCCTCCCCTCAAGCGCCACCTCCGCCCGATCAATGTCCTTCTCCTCCAGATCTTCAAGGTCCTCCATCTCGCCTTTCAGGTCGAGAAAGTCATCCGAACCACCTGTCAAAGGCGCCACTGCTCGTCCCACCAAGCCTCAAACATCGAAGCCACCTATTTCCCCGTCGACTCC...

CDS

Download CDS FASTA

3330 bp · TkA03G201100|TK1151|CDS

TCACTTCTTTTTTCAGCTCTGAAAAATTCAAAGTTAAAACATTTTGGAGGGATAAAACCAAGGGCGGCAAACCAGTGCCATAGCCGGCCCCTCCCCTCAAGCGCCACCTCCGCCCGATCAATGTCCTTCTCCTCCAGATCTTCAAGGTCCTCCATCTCGCCTTTCAGGTCGAGAAAGTCATCCGAACCACCTGTCAAAGGCGCCACTGCTCGTCCCACCAAGCCTCAAACATCGAAGCCACCTATTTCCCCGTCGACTCC...

Protein

Download Protein FASTA

1109 aa · TkA03G201100|TK1151|PROTEIN

SLLFSALKNSKLKHFGGIKPRAANQCHSRPLPSSATSARSMSFSSRSSRSSISPFRSRKSSEPPVKGATARPTKPQTSKPPISPSTPSISSTKLSERPISTNIKENVTVTVRLRPLNSREIGKGDEIAWFADGDYSLQNEFNPALAYGFDRVFGPATTTRHVYDVAAHHVVNGAMEGINGTVFAYGVTSSGKTHTMHGEQKSPGIIPLAVKDVFGIIQETPGREFLLRVSYLEIYNEVINDLLNPTGQNLRIREDNQGTY...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA03G201100
TK1151 IDTkA03G201100
OH-1004 IDLXL04_007641
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)98.500
Protein coverage (%)TK1151 96.032 / OH-1004 98.889
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G201100
LocationChr03:50515143-50521316 (+)
DescriptionSimilar to KIN7E: Kinesin-like protein KIN-7E, chloroplastic
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g21730 Kinesin-like protein KIN-7C, mitochondrial. No verified direct reference in this release
At5g06670 Kinesin-like protein KIN-7L, chloroplastic. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0434600 Kinesin-like protein KIN-7E, chloroplastic. No verified direct reference in this release
Os02g0775400 Probable minus end-directed motor protein with a microtubule-enhanced ATPase activity. No verified direct reference in this release
Os10g0512800 Kinesin-like protein KIN-7K, chloroplastic. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_007641 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007018 microtubule-based movement Biological Process
GO:0031347 regulation of defense response Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005739 mitochondrion Cellular Component
GO:0005871 kinesin complex Cellular Component
GO:0005874 microtubule Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0000287 magnesium ion binding Molecular Function
GO:0003777 microtubule motor activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0008017 microtubule binding Molecular Function
KEGG gene cross-reference
ath:AT1G21730
ath:AT4G39050
ath:AT5G06670
osa:9271714
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.634
Rank 1 · TkA03G201100 · TK1151
Nucleus0.325
Rank 2 · TkA03G201100 · TK1151
Cell membrane0.120
Rank 3 · TkA03G201100 · TK1151
Golgi apparatus0.057
Rank 4 · TkA03G201100 · TK1151
Lysosome / Vacuole0.046
Rank 5 · TkA03G201100 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF16796Microtub_bd106-243 aa
PF00225Kinesin112-424 aa
PF19697Atg11_middle202-210 aa
PF05951Peptidase_M15_2345-433 aa
PF16796Microtub_bd393-445 aa
PF19697Atg11_middle427-457 aa
PF17414MatP_C431-457 aa
PF05951Peptidase_M15_2557-582 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA03G201100PF16796Microtub_bd1062439.5e-2071.8
TkA03G201100PF00225Kinesin1124244.6e-104348.7
TkA03G201100PF19697Atg11_middle2022100.1712.8
TkA03G201100PF05951Peptidase_M15_23454330.2511.8
TkA03G201100PF16796Microtub_bd3934459.5e-2071.8
TkA03G201100PF19697Atg11_middle4274570.1712.8
TkA03G201100PF17414MatP_C4314570.1513.1
TkA03G201100PF05951Peptidase_M15_25575820.2511.8
TkA03G201100PF04728LPP6646967.07.7
TkA03G201100PF16796Microtub_bd7217599.5e-2071.8
TkA03G201100PF00225Kinesin7427654.6e-104348.7
TkA03G201100PF04728LPP8698877.07.7
TkA03G201100PF30366YehQ_4HB8919590.4811.3
TkA03G201100PF19697Atg11_middle8999390.1712.8
TkA03G201100PF04728LPP9149417.07.7
TkA03G201100PF19697Atg11_middle9419760.1712.8

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q8W5R6Arabidopsis thalianasp|Q8W5R6|KN7C_ARATH Kinesin-like protein KIN-7C, mitochondrial65.400%Swiss-ProtHigh
F4K3X8Arabidopsis thalianasp|F4K3X8|KN7L_ARATH Kinesin-like protein KIN-7L, chloroplastic52.200%Swiss-ProtHigh
B9FFA3Oryza sativa subsp. japonicasp|B9FFA3|KN7E_ORYSJ Kinesin-like protein KIN-7E, chloroplastic63.800%Swiss-ProtHigh
Q6YZ52Oryza sativa subsp. japonicasp|Q6YZ52|KN7D_ORYSJ Kinesin-like protein KIN-7D, chloroplastic54.100%Swiss-ProtHigh
Q9FW70Oryza sativa subsp. japonicasp|Q9FW70|KN7K_ORYSJ Kinesin-like protein KIN-7K, chloroplastic52.100%Swiss-ProtHigh

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