Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1066 bp · TkA03G189920|TK1151|cDNA
GAAATCGATTATGTGATGGATACTACTACAGAGAAACGTACGAATAAAAAGGAGAGGGCCAAGGAGCGTAGAGAGAATCGTCACCAAGAGATCTCTCGCCTCCGTACCATTCCTTATTCAGACCACGAGAGAAACAATAGCGGCAGTGACCGGAGCTAATCCAGGAATTGGATTTGAGATTGCACGCCAGCTTGCATCACATGGATTGACAGTCATTCTTACTTCAAGAGACGCTACTCTAGGGGAAGAAGCAACCAAGG...
495 bp · TkA03G189920|TK1151|CDS
ATGATTAAATCTGCGCTTCCATTGATGAAACCTTCTTCTGAAGGTGCTCGGATAGTTAACGTGCGCTCACGATTGGGGAGACTTAATGGCAGAAGAAATAGGATTGCGGATGTTGGACTGAGACAGAAATTAGAAGATCCGGAGTTGTTATCTGAAGACGTGATTGATGCGACTATGAACAAGTTTTTGGAAGAAGTGAAAGATGGGAGTTGGATCTCGGGAGGATGGCCTCAAAACAATACGGATTATTCATTGTCGAA...
Protein
Download Protein FASTA164 aa · TkA03G189920|TK1151|PROTEIN
MIKSALPLMKPSSEGARIVNVRSRLGRLNGRRNRIADVGLRQKLEDPELLSEDVIDATMNKFLEEVKDGSWISGGWPQNNTDYSLSKLAVNCYTRVMGRVLAGRGDGEKIYINCCCPGWVKTAMTGWAGLTSPEVGADTAVWLALLRDQSVNGKFFAERREINF
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA03G189920 |
|---|---|
| TK1151 ID | TkA03G189920 |
| OH-1004 ID | LXL04_007557 |
| Relationship / confidence | Sequence Supported Annotation Or Model Conflict / Review |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 50.153Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA03G189920 |
|---|---|
| Location | Chr03:47794264-47795589 (+) |
| Description | Similar to CBR1: Carbonyl reductase [NADPH] 1 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006629 lipid metabolic process Biological Process GO:0006706 steroid catabolic process Biological Process GO:0006805 xenobiotic metabolic process Biological Process GO:0008211 glucocorticoid metabolic process Biological Process GO:0032355 response to estradiol Biological Process GO:0032570 response to progesterone Biological Process GO:0042373 vitamin K metabolic process Biological Process GO:0042376 phylloquinone catabolic process Biological Process GO:0046457 prostanoid biosynthetic process Biological Process GO:1905344 prostaglandin catabolic process Biological Process GO:2000379 positive regulation of reactive oxygen species metabolic process Biological Process GO:0005737 cytoplasm Cellular Component |
| KEGG gene cross-reference | hsa:873 mmu:12408 ssc:397143 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00106adh_short1-28 aaPF13561adh_short_C21-24 aaPF13561adh_short_C275-125 aaPF00106adh_short79-125 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA03G189920 | PF00106 | adh_short | 1 | 28 | 1.3e-08 | 35.3 |
| TkA03G189920 | PF13561 | adh_short_C2 | 1 | 24 | 1.8e-05 | 25.1 |
| TkA03G189920 | PF13561 | adh_short_C2 | 75 | 125 | 1.8e-05 | 25.1 |
| TkA03G189920 | PF00106 | adh_short | 79 | 125 | 1.3e-08 | 35.3 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.