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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA03G101350
Reference: TK1151 Chr: Chr03 Coordinates: 25616621-25623470 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

3417 bp · TkA03G101350|TK1151|cDNA

TAACAAATTCCAGTTAAATATTCATTAATTATTGGAAAACTCTAGCAAAATGATTGAGAAATTAATGTTAATTTATTCTAATTCAAGCTTTGCCTCTCATCTTCCTTTCAATGCATCATCAAATACTCCTATTTTAGTCAAACCCCTTTCCTAATCCAAGAACCCTATTGTCTCATGCTCTTTTCTTCTTAAAATCACCAAATACTCAAAAGGGTTTTCTCAGAATTTAAAGTTATAAATCACAGTTTTTCTTTTTTATT...

CDS

Download CDS FASTA

2775 bp · TkA03G101350|TK1151|CDS

ATGATGGAAGGATTGAATTATCAGAATTCAAGATTGGTTTTCTGTTGTGTTATAATCTGTTTCTTCATAGCTATCCAATCAACCTGTTCACAAGAAGATTTTCTAAGTATCCAGTGTTGTGCGGATTCAAACTCCACCGATCCAAAAACCAACATAACATGGATTTCAGATAACAAATGGTTCAAAAACAACCAACAATGCCAAGACATAATAACACCATTACAAAACAGTACAACTTATGATCATGCTCGATTTTTTGA...

Protein

Download Protein FASTA

924 aa · TkA03G101350|TK1151|PROTEIN

MMEGLNYQNSRLVFCCVIICFFIAIQSTCSQEDFLSIQCCADSNSTDPKTNITWISDNKWFKNNQQCQDIITPLQNSTTYDHARFFDTNHGTKWCYNLPTKRGHDYLVRGTFVTSPIDTFFDVLVGTTPIGRVGPLDEDEIEGIVKANDDYIDFCLLKKQGNPYVSKIELRPLDLDYGEPLNVFKVVHRVDVGNTQGEIRYPQDQYDRIWKADSGLNQNKNSTLLNGDTIIQNGTKSSPPMEVLQTARTHLERLEFLHTL...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA03G101350
TK1151 IDTkA03G101350
OH-1004 IDLXL04_006956
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)95.300
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G101350
LocationChr03:25616621-25623470 (+)
DescriptionSimilar to NORK: Nodulation receptor kinase
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g67720 Probable LRR receptor-like serine/threonine-protein kinase At1g67720. No verified direct reference in this release
At5g48740 Probable LRR receptor-like serine/threonine-protein kinase At5g48740. No verified direct reference in this release
At3g21340 Probable receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_006956 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0009877 nodulation Biological Process
GO:0046777 protein autophosphorylation Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0016020 membrane Cellular Component
GO:0004672 protein kinase activity Molecular Function
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0004714 transmembrane receptor protein tyrosine kinase activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0106310 protein serine kinase activity Molecular Function
KEGG gene cross-reference
ath:AT1G67720
ath:AT3G21340
ath:AT5G48740
mtr:11407326
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.848
Rank 1 · TkA03G101350 · TK1151
Cytoplasm0.088
Rank 2 · TkA03G101350 · TK1151
Endoplasmic reticulum0.084
Rank 3 · TkA03G101350 · TK1151
Nucleus0.049
Rank 4 · TkA03G101350 · TK1151
Lysosome / Vacuole0.032
Rank 5 · TkA03G101350 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF11721Malectin37-109 aa
PF12819Malectin_like39-346 aa
PF11721Malectin194-305 aa
PF15942DUF4751261-346 aa
PF03144GTP_EFTU_D2276-294 aa
PF08263LRRNT_2355-397 aa
PF00560LRR_1406-423 aa
PF12799LRR_4406-443 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA03G101350PF11721Malectin371093.2e-0937.7
TkA03G101350PF12819Malectin_like393462.2e-49169.2
TkA03G101350PF11721Malectin1943053.2e-0937.7
TkA03G101350PF15942DUF47512613460.04914.4
TkA03G101350PF03144GTP_EFTU_D22762940.1513.2
TkA03G101350PF08263LRRNT_23553978.1e-0833.1
TkA03G101350PF00560LRR_14064233.7e-0523.7
TkA03G101350PF12799LRR_44064430.003118.4
TkA03G101350PF00560LRR_14284443.7e-0523.7
TkA03G101350PF13855LRR_84284803.9e-0524.0
TkA03G101350PF12819Malectin_like4394822.2e-49169.2
TkA03G101350PF00560LRR_14524733.7e-0523.7
TkA03G101350PF12799LRR_44554800.003118.4
TkA03G101350PF25034Spectrin_SYNE15766300.3211.3
TkA03G101350PF07714PK_Tyr_Ser-Thr5978661.9e-43149.4
TkA03G101350PF00069Pkinase5978012.7e-40139.1

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
C0LGI2Arabidopsis thalianasp|C0LGI2|Y1677_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g6772033.500%Swiss-ProtMedium
C0LGV0Arabidopsis thalianasp|C0LGV0|Y5487_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g4874032.900%Swiss-ProtMedium
Q9LIG2Arabidopsis thalianasp|Q9LIG2|RLK6_ARATH Receptor-like protein kinase At3g2134030.700%Swiss-ProtMedium

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