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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA03G015880
Reference: TK1151 Chr: Chr03 Coordinates: 4080567-4095748 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

4173 bp · TkA03G015880|TK1151|cDNA

ATGTCAAGTGTGTCTGCTGATATGGGGTGTGCGGGTAGGAACCGGGAACACCTCACACCTTCTGCATCCGTTGTACTAGGTGTGAGTGTGGGGTTGGTTGCATGGCCTGAGTCTAGCATACGAAGCGGGGGTTTTCAGACTGGGTCGGCTCAGGTGGTTGGTGGTGGAGTATGGGCAAGGATTGTGGGGGCCATTAATCGGTTACATGCTACTGCTGTTCTTATGGAGTCTAGTATGGTGCGGGTGCTTGGAGATGGGGC...

CDS

Download CDS FASTA

4173 bp · TkA03G015880|TK1151|CDS

ATGTCAAGTGTGTCTGCTGATATGGGGTGTGCGGGTAGGAACCGGGAACACCTCACACCTTCTGCATCCGTTGTACTAGGTGTGAGTGTGGGGTTGGTTGCATGGCCTGAGTCTAGCATACGAAGCGGGGGTTTTCAGACTGGGTCGGCTCAGGTGGTTGGTGGTGGAGTATGGGCAAGGATTGTGGGGGCCATTAATCGGTTACATGCTACTGCTGTTCTTATGGAGTCTAGTATGGTGCGGGTGCTTGGAGATGGGGC...

Protein

Download Protein FASTA

1390 aa · TkA03G015880|TK1151|PROTEIN

MSSVSADMGCAGRNREHLTPSASVVLGVSVGLVAWPESSIRSGGFQTGSAQVVGGGVWARIVGAINRLHATAVLMESSMVRVLGDGAHTRLFALALDPDAPVRDLHDGEDSKFARRRDIRGGVEQSQMAILLELLGSTSVMARPDSWGWNLDHSGDFTVRSVRRHIYDSRLPAAGRVTRWNPFLCPVCTDVAESVSHLFFMCQMARDVWRLVARWLQLDVPDFISAANMVDWVDSRPVARMERSIVDAVCSTGITCSHNG...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA03G015880
TK1151 IDTkA03G015880
OH-1004 IDLXL04_006182
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)86.300
Protein coverage (%)TK1151 97.554 / OH-1004 42.936
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G015880
LocationChr03:4080567-4095748 (+)
DescriptionSimilar to mcd4: GPI ethanolamine phosphate transferase 1 (Aspergillus oryzae (strain ATCC 42149 / RIB 40)
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_006182 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006506 GPI anchor biosynthetic process Biological Process
GO:0071555 cell wall organization Biological Process
GO:0005789 endoplasmic reticulum membrane Cellular Component
GO:0005829 cytosol Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0016020 membrane Cellular Component
GO:0051377 mannose-ethanolamine phosphotransferase activity Molecular Function
KEGG gene cross-reference
afm:AFUA_4G03970
aor:AO090011000320
hsa:23556
ncr:NCU07999
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Endoplasmic reticulum0.581
Rank 1 · TkA03G015880 · TK1151
Golgi apparatus0.158
Rank 2 · TkA03G015880 · TK1151
Nucleus0.134
Rank 3 · TkA03G015880 · TK1151
Cell membrane0.130
Rank 4 · TkA03G015880 · TK1151
Cytoplasm0.105
Rank 5 · TkA03G015880 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF13966zf-RVT163-209 aa
PF00884Sulfatase252-313 aa
PF01663Phosphodiest405-621 aa
PF01676Metalloenzyme543-646 aa
PF00884Sulfatase580-653 aa
PF10500SR-25646-673 aa
PF27961CSNKA2IP648-671 aa
PF17054JUPITER653-743 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA03G015880PF13966zf-RVT1632092.7e-0525.4
TkA03G015880PF00884Sulfatase2523132.7e-0627.7
TkA03G015880PF01663Phosphodiest4056212e-0835.0
TkA03G015880PF01676Metalloenzyme5436460.000819.7
TkA03G015880PF00884Sulfatase5806532.7e-0627.7
TkA03G015880PF10500SR-256466730.1412.4
TkA03G015880PF27961CSNKA2IP6486710.879.7
TkA03G015880PF17054JUPITER6537430.08813.0
TkA03G015880PF13727CoA_binding_37377665.17.7
TkA03G015880PF04987PigN80811923.3e-91307.1
TkA03G015880PF13727CoA_binding_39319735.17.7
TkA03G015880PF13966zf-RVT103410542.7e-0525.4
TkA03G015880PF13727CoA_binding_3107211245.17.7
TkA03G015880PF04987PigN120412593.3e-91307.1

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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