Gene Card
Gene overview
cDNA / CDS / Protein Sequences
324 bp · TkA02G515420|TK1151|cDNA
ATGTCAGCGGCATCGTTAGACTGGATCACTGGACGGAATGGCGTCGAAAAAGCCAGCGGCAAGCCAGCTGGCTTAGTTTACCGTTGGCAAAGGATACGGAGTGGAGAAAGCCAACGGCAAACTCCAGCGGCCCGCCTAAGCCGTTGGAGTTTGCCAGCGGCAAACTCCCCAAAAAGTGAAAACATCCTACGTGTCGCCTACGTGGCACAGTTTGCCTCTGCAAACTTTACCTACCACTCCGTCCAGTCTTATATGTACCC...
324 bp · TkA02G515420|TK1151|CDS
ATGTCAGCGGCATCGTTAGACTGGATCACTGGACGGAATGGCGTCGAAAAAGCCAGCGGCAAGCCAGCTGGCTTAGTTTACCGTTGGCAAAGGATACGGAGTGGAGAAAGCCAACGGCAAACTCCAGCGGCCCGCCTAAGCCGTTGGAGTTTGCCAGCGGCAAACTCCCCAAAAAGTGAAAACATCCTACGTGTCGCCTACGTGGCACAGTTTGCCTCTGCAAACTTTACCTACCACTCCGTCCAGTCTTATATGTACCC...
Protein
Download Protein FASTA107 aa · TkA02G515420|TK1151|PROTEIN
MSAASLDWITGRNGVEKASGKPAGLVYRWQRIRSGESQRQTPAARLSRWSLPAANSPKSENILRVAYVAQFASANFTYHSVQSYMYPAIFPKFPNAPSILSFSDFFI
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA02G515420 |
|---|---|
| TK1151 ID | TkA02G515420 |
| OH-1004 ID | LXL04_001729 |
| Relationship / confidence | Rbh Below Probable Coverage Or Synteny Threshold / Review |
| Protein identity (%) | 57.000 |
| Protein coverage (%) | TK1151 70.093 / OH-1004 25.410Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA02G515420 |
|---|---|
| Location | Chr02:132774468-132774913 (-) |
| Description | Similar to At5g13980: Probable alpha-mannosidase At5g13980 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006013 mannose metabolic process Biological Process GO:0045088 regulation of innate immune response Biological Process GO:0052542 defense response by callose deposition Biological Process GO:0000325 plant-type vacuole Cellular Component GO:0000326 protein storage vacuole Cellular Component GO:0005576 extracellular region Cellular Component GO:0005773 vacuole Cellular Component GO:0005886 plasma membrane Cellular Component GO:0009505 plant-type cell wall Cellular Component GO:0009507 chloroplast Cellular Component GO:0048046 apoplast Cellular Component GO:0099503 secretory vesicle Cellular Component |
| KEGG gene cross-reference | ath:AT1G56140 ath:AT3G26720 ath:AT5G13980 ath:AT5G66150 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.