Gene Card
Gene overview
cDNA / CDS / Protein Sequences
953 bp · TkA02G267910|TK1151|cDNA
CACAAATCTGTCGAACTAATGAAATACAGGCGGGAATTTTGTCTATCCACAGGCTCTAGATAAACAGATAGAAAGTAAGACACGAACCTCATCATCCCCAGAAATGGCGATCTTCACACTTCAAACGCTAACCACCCCATCTCTCCACCATACCGTTCAACTCTCCGCCACCAGGCCACACCAGAACGGCACCATCATTAAGTCGCATTCGAATTCGAAATGTTCTATAGATCCGACAAGTAATTCCACTCCTAATCCCA...
672 bp · TkA02G267910|TK1151|CDS
ATGGCGATCTTCACACTTCAAACGCTAACCACCCCATCTCTCCACCATACCGTTCAACTCTCCGCCACCAGGCCACACCAGAACGGCACCATCATTAAGTCGCATTCGAATTCGAAATGTTCTATAGATCCGACAAGTAATTCCACTCCTAATCCCAACAACAAGAGGAGATTAGTTGGTGTAGGTATTGGATTGTTAGCTGCTTCGATGCTAATCTCATCCCCGCTCGATGCTAATGCTACTAGAATCGAGTATTACGC...
Protein
Download Protein FASTA223 aa · TkA02G267910|TK1151|PROTEIN
MAIFTLQTLTTPSLHHTVQLSATRPHQNGTIIKSHSNSKCSIDPTSNSTPNPNNKRRLVGVGIGLLAASMLISSPLDANATRIEYYATVAEPSCELQFAPSGLGYCDVAPGFGEEAPYSTLINIHYTARFADGIVFDSSYKRGRPLTMRIGVGKVIKGLDQGIFGGEGVPPMLVGGRRRLQIPPELAYGPEPAGCFSGECNIPANATLLYDINFVNIYSGNRK
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA02G267910 |
|---|---|
| TK1151 ID | TkA02G267910 |
| OH-1004 ID | LXL04_015947 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 98.200 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA02G267910 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr02:68470526-68472424 (+) | |||||||||
| Description | Similar to PNSL4: Photosynthetic NDH subunit of lumenal location 4, chloroplastic | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0005576 extracellular region Cellular Component GO:0005783 endoplasmic reticulum Cellular Component GO:0005886 plasma membrane Cellular Component GO:0009507 chloroplast Cellular Component GO:0009535 chloroplast thylakoid membrane Cellular Component GO:0009536 plastid Cellular Component GO:0009543 chloroplast thylakoid lumen Cellular Component GO:0009579 thylakoid Cellular Component GO:0031977 thylakoid lumen Cellular Component GO:0003755 peptidyl-prolyl cis-trans isomerase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT4G39710 ath:AT5G45680 nma:NMA0273 nme:NMB0027 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00254FKBP_C119-213 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA02G267910 | PF00254 | FKBP_C | 119 | 213 | 1.6e-23 | 83.6 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.