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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G239100
Reference: TK1151 Chr: Chr02 Coordinates: 61543920-61547771 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2146 bp · TkA02G239100|TK1151|cDNA

TGATTAATCGAATCTGTTATACATATTCAGCGCAGCCAGGCCTCCATTTCTCCACTCACTGTCTCCACGGTTCTATTCTGCATGCCCTTGTTCGATACCTAATCCTCTGCGTAGATTCTAAAGCCATTTTTGATTGATTTTAGACACTGCCAGACGCCATGTGTGGAATACTCGCGGTATTTGGTTGTGTGGATTGCTCTCAGGCCAAGAGGTCCAGAATCATTGAACTTTCCAGACGGTTGCGCCATAGAGGTCCTGAT...

CDS

Download CDS FASTA

1539 bp · TkA02G239100|TK1151|CDS

ATGTGTGGAATACTCGCGGTATTTGGTTGTGTGGATTGCTCTCAGGCCAAGAGGTCCAGAATCATTGAACTTTCCAGACGGTTGCGCCATAGAGGTCCTGATTGGAGTGGGCTGCACAGTGAGCAAGACTGTTATCTTGCTCATCAACGGTTAGCCATTGTAGACCCTGCTTCAGGAGATCAACCCCTTTACAATGAAGACAAGACCATTATTGTCACGGTTAATGGGGAGATATACAACCATAAAGCCTTAAAGGAGAA...

Protein

Download Protein FASTA

512 aa · TkA02G239100|TK1151|PROTEIN

MCGILAVFGCVDCSQAKRSRIIELSRRLRHRGPDWSGLHSEQDCYLAHQRLAIVDPASGDQPLYNEDKTIIVTVNGEIYNHKALKEKLKSHKFNTGSDCEVIAHLYEEYGEDFVHMLDGMFSFVLLDTRDKSYIAARDAIGITPLYMGWGLDGSVWFASEMKALSDDCEQFMSFLPGHIYSSKIGGLRRWYNPTWYSERIPSTPYDPLVLRHAFEKAVIKRLMTDVPFGVLLSGGLDSSLVAAVASRHLANSEASWQWGS...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G239100
TK1151 IDTkA02G239100
OH-1004 IDLXL04_018682
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)75.000
Protein coverage (%)TK1151 6.250 / OH-1004 19.048
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G239100
LocationChr02:61543920-61547771 (-)
DescriptionSimilar to Prep: Prolyl endopeptidase
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g65010 Essential for nitrogen assimilation, distribution and remobilization within the plant via the phloem.
Arabidopsis thaliana ASN2 encoding asparagine synthetase is involved in the control of nitrogen assimilation and export during vegetative growth.2013 · DOI: 10.1111/j.1365-3040.2012.02576.x
At5g10240 Essential for nitrogen assimilation, distribution and remobilization within the plant via the phloem. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os06g0265000 Essential for nitrogen assimilation, distribution and remobilization within the plant via the phloem. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_018682 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0002003 angiotensin maturation Biological Process
GO:0006508 proteolysis Biological Process
GO:0030163 protein catabolic process Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005829 cytosol Cellular Component
GO:0016020 membrane Cellular Component
GO:0004175 endopeptidase activity Molecular Function
GO:0004181 metallocarboxypeptidase activity Molecular Function
GO:0004252 serine-type endopeptidase activity Molecular Function
GO:0008233 peptidase activity Molecular Function
KEGG gene cross-reference
bta:286818
hsa:5550
mmu:19072
rno:83471
ssc:445540
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.682
Rank 1 · TkA02G239100 · TK1151
Nucleus0.231
Rank 2 · TkA02G239100 · TK1151
Peroxisome0.136
Rank 3 · TkA02G239100 · TK1151
Mitochondrion0.120
Rank 4 · TkA02G239100 · TK1151
Cell membrane0.040
Rank 5 · TkA02G239100 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF13522GATase_61-168 aa
PF12481DUF370021-33 aa
PF13537GATase_748-165 aa
PF24712YxiG_292-114 aa
PF16901DAO_C94-117 aa
PF12481DUF3700112-200 aa
PF24712YxiG_2191-294 aa
PF00733Asn_synthase210-361 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G239100PF13522GATase_611681.1e-56192.4
TkA02G239100PF12481DUF370021331.2e-1041.9
TkA02G239100PF13537GATase_7481651.2e-42145.5
TkA02G239100PF24712YxiG_2921140.006317.3
TkA02G239100PF16901DAO_C941170.1712.5
TkA02G239100PF12481DUF37001122001.2e-1041.9
TkA02G239100PF24712YxiG_21912940.006317.3
TkA02G239100PF00733Asn_synthase2103611.9e-87294.9
TkA02G239100PF02540NAD_synthase2292920.02214.6
TkA02G239100PF06508QueC2302930.1312.4
TkA02G239100PF03054tRNA_Me_trans2302960.3111.4
TkA02G239100PF16901DAO_C2783080.1712.5
TkA02G239100PF13522GATase_63253841.1e-56192.4
TkA02G239100PF00733Asn_synthase3594871.9e-87294.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9LV77Arabidopsis thalianasp|Q9LV77|ASNS2_ARATH Asparagine synthetase [glutamine-hydrolyzing] 286.400%Swiss-ProtHigh
Q9LFU1Arabidopsis thalianasp|Q9LFU1|ASNS3_ARATH Asparagine synthetase [glutamine-hydrolyzing] 386.200%Swiss-ProtHigh
Q43011Oryza sativa subsp. japonicasp|Q43011|ASNS2_ORYSJ Asparagine synthetase [glutamine-hydrolyzing] 284.600%Swiss-ProtHigh

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