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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA02G049430
Reference: TK1151 Chr: Chr02 Coordinates: 12858017-12858358 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

342 bp · TkA02G049430|TK1151|cDNA

ATGCCAATCGCCAATCGCCAATCGCCAATTGCAATTTCAAATCTCCAATCGCAATTTCAAATCGCCAATCGCCAGTGCAATTCCAAATCTCTAATCGCCAATCGCCAATCGCAAGTTTGCTCTCGGTCTCTCCTTCAATTACAAGTTGTGACTCCTCATCAAGTAACACTCCTCTCTCGGTCTCTCCTTCAATTACAAATTGCGACTCTCTCTCTCGGCCGACATCCATCCGGTACGTCTCCCTGTCTCTCGCTGTCTCC...

342 bp · TkA02G049430|TK1151|CDS

ATGCCAATCGCCAATCGCCAATCGCCAATTGCAATTTCAAATCTCCAATCGCAATTTCAAATCGCCAATCGCCAGTGCAATTCCAAATCTCTAATCGCCAATCGCCAATCGCAAGTTTGCTCTCGGTCTCTCCTTCAATTACAAGTTGTGACTCCTCATCAAGTAACACTCCTCTCTCGGTCTCTCCTTCAATTACAAATTGCGACTCTCTCTCTCGGCCGACATCCATCCGGTACGTCTCCCTGTCTCTCGCTGTCTCC...

113 aa · TkA02G049430|TK1151|PROTEIN

MPIANRQSPIAISNLQSQFQIANRQCNSKSLIANRQSQVCSRSLLQLQVVTPHQVTLLSRSLLQLQIATLSLGRHPSGTSPCLSLSPSFSFNFKSQFQISTGYCYLLLFTISK

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G049430
TK1151 IDTkA02G049430
OH-1004 IDLXL04_022374
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)84.000
Protein coverage (%)TK1151 66.372 / OH-1004 29.297
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G049430
LocationChr02:12858017-12858358 (+)
DescriptionSimilar to COQ3: Ubiquinone biosynthesis O-methyltransferase, mitochondrial
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_022374 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006744 ubiquinone biosynthetic process Biological Process
GO:0032259 methylation Biological Process
GO:0005739 mitochondrion Cellular Component
GO:0005740 mitochondrial envelope Cellular Component
GO:0031314 extrinsic component of mitochondrial inner membrane Cellular Component
GO:0010420 polyprenyldihydroxybenzoate methyltransferase activity Molecular Function
GO:0046872 metal ion binding Molecular Function
GO:0061542 3-demethylubiquinol 3-O-methyltransferase activity Molecular Function
GO:0102208 2-polyprenyl-6-hydroxyphenol methylase activity Molecular Function
GO:0120537 3-demethylubiquinone 3-O-methyltransferase activity Molecular Function
KEGG gene cross-reference
ath:AT2G30920
mag:amb1611
rpc:RPC_0515
rpe:RPE_0157
rru:Rru_A0742
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.520
Rank 1 · TkA02G049430 · TK1151
Nucleus0.490
Rank 2 · TkA02G049430 · TK1151
Mitochondrion0.063
Rank 3 · TkA02G049430 · TK1151
Cell membrane0.053
Rank 4 · TkA02G049430 · TK1151
Endoplasmic reticulum0.045
Rank 5 · TkA02G049430 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

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