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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

LXL04_022374
Reference: OH-1004 Chr: Chr04 Coordinates: 149305250-149310085 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

771 bp · LXL04_022374|LXL04_022374|OH1004|cDNA

ATGAGAGCATATGCAACTGCAATTGTGGCAGCAGAATACATCCTGCATTGGGATTCACTTAAAGCTCTTGAAGCTGATATGCCATTACTCTGTTTGGTGATCCGCGCGTATTCTTTCTCGACCGACCATTCCGTCTTCTATCTTTCTCCCACTCTTACGATTTCAAGGGTTTCCGTTAATGCCAATCGCCAATCGCCAATCGCAATTTCAAATCTCCAATCGCAATTTCAAATCGCCAATCGCCAGTGCAATTCCAAATC...

771 bp · LXL04_022374|LXL04_022374|OH1004|CDS

ATGAGAGCATATGCAACTGCAATTGTGGCAGCAGAATACATCCTGCATTGGGATTCACTTAAAGCTCTTGAAGCTGATATGCCATTACTCTGTTTGGTGATCCGCGCGTATTCTTTCTCGACCGACCATTCCGTCTTCTATCTTTCTCCCACTCTTACGATTTCAAGGGTTTCCGTTAATGCCAATCGCCAATCGCCAATCGCAATTTCAAATCTCCAATCGCAATTTCAAATCGCCAATCGCCAGTGCAATTCCAAATC...

256 aa · LXL04_022374|LXL04_022374|OH1004|PROTEIN

MRAYATAIVAAEYILHWDSLKALEADMPLLCLVIRAYSFSTDHSVFYLSPTLTISRVSVNANRQSPIAISNLQSQFQIANRQCNSKSLIANRQSQVCSRSLLQLQVVTPHQVTVLSRSLLQLQIATLSLGRHPSGNLGRAEKVEPPKQKASKSPRGFDDLLPGFGSGGPASGSRYVCCRKCLSGMSVVYFVVVQLPKGTHQWSSFLTLEELVLILQRTSVSVEEMAGFAYDPLTGQWSLTDDVGVNFIAFGIKNSE

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDLXL04_022374
Source versionOH-1004 / GCA_047496595.1_OSU_TarKok_2.0
SNP / Indel variants and carrier samplesCRA009020 · OH-1004

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDLXL04_022374
LocationChr04:149305250-149310085 (-)
DescriptionSimilar to COQ3: Ubiquinone biosynthesis O-methyltransferase, mitochondrial
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g30920 O-methyltransferase required for two non-consecutive steps during ubiquinone biosynthesis. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_022374 · GCA_047496595.1_OSU_TarKok_2.0.

GO annotations (OH1004 source)
GO:0006744 ubiquinone biosynthetic process Biological Process
GO:0032259 methylation Biological Process
GO:0005739 mitochondrion Cellular Component
GO:0005740 mitochondrial envelope Cellular Component
GO:0031314 extrinsic component of mitochondrial inner membrane Cellular Component
GO:0010420 polyprenyldihydroxybenzoate methyltransferase activity Molecular Function
GO:0046872 metal ion binding Molecular Function
GO:0061542 3-demethylubiquinol 3-O-methyltransferase activity Molecular Function
GO:0102208 2-polyprenyl-6-hydroxyphenol methylase activity Molecular Function
GO:0120537 3-demethylubiquinone 3-O-methyltransferase activity Molecular Function
KEGG gene cross-reference
ath:AT2G30920
mag:amb1611
rpc:RPC_0515
rpe:RPE_0157
rru:Rru_A0742
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.445
Rank 1 · LXL04_022374 · OH-1004
Nucleus0.399
Rank 2 · LXL04_022374 · OH-1004
Cell membrane0.117
Rank 3 · LXL04_022374 · OH-1004
Mitochondrion0.115
Rank 4 · LXL04_022374 · OH-1004
Endoplasmic reticulum0.090
Rank 5 · LXL04_022374 · OH-1004

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
O49354Arabidopsis thalianaUbiquinone biosynthesis O-methyltransferase, mitochondrial58.209%Swiss-Protweak database homology

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