Gene Card
Gene overview
cDNA / CDS / Protein Sequences
510 bp · TkA02G045990|TK1151|cDNA
ATGGCATCCACTCAATGCCTAACATGTATTTGCTACCATCGTCTTCACCATCATCACAATCTTTCTCATAAACTTCCATCAAACAGTTACAGTACTATCATCATCAATTCCAAGAAAACCTCCATAGTCTCTAAAACCAATATCAGGAGCAGAAGAAGAAGAATATATGTACAAAAAGCGATGAATACAGAAGATAAGATACAAACAGATGTAGGTGAAGAGATCAAGAAGGAAAGAAGGGTAAGGATTCTGATCGCCGG...
510 bp · TkA02G045990|TK1151|CDS
ATGGCATCCACTCAATGCCTAACATGTATTTGCTACCATCGTCTTCACCATCATCACAATCTTTCTCATAAACTTCCATCAAACAGTTACAGTACTATCATCATCAATTCCAAGAAAACCTCCATAGTCTCTAAAACCAATATCAGGAGCAGAAGAAGAAGAATATATGTACAAAAAGCGATGAATACAGAAGATAAGATACAAACAGATGTAGGTGAAGAGATCAAGAAGGAAAGAAGGGTAAGGATTCTGATCGCCGG...
Protein
Download Protein FASTA169 aa · TkA02G045990|TK1151|PROTEIN
MASTQCLTCICYHRLHHHHNLSHKLPSNSYSTIIINSKKTSIVSKTNIRSRRRRIYVQKAMNTEDKIQTDVGEEIKKERRVRILIAGGGVGGLVLALAAKERGFDVMVFEKNLSAVRGEGRHRGPIQLMSSALGVLVGIDERVAEQVMEAGCVTGDRLNGLVDGLSGDW
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA02G045990 |
|---|---|
| TK1151 ID | TkA02G045990 |
| OH-1004 ID | LXL04_017380 |
| Relationship / confidence | Rbh Below Probable Coverage Or Synteny Threshold / Review |
| Protein identity (%) | 87.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA02G045990 |
|---|---|
| Location | Chr02:11842276-11842785 (-) |
| Description | Similar to SOVF_077800: Zeaxanthin epoxidase, chloroplastic |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006970 response to osmotic stress Biological Process GO:0009408 response to heat Biological Process GO:0009414 response to water deprivation Biological Process GO:0009688 abscisic acid biosynthetic process Biological Process GO:0010114 response to red light Biological Process GO:0010182 sugar mediated signaling pathway Biological Process GO:0016123 xanthophyll biosynthetic process Biological Process GO:0009507 chloroplast Cellular Component GO:0009535 chloroplast thylakoid membrane Cellular Component GO:0009536 plastid Cellular Component GO:0009941 chloroplast envelope Cellular Component GO:0016020 membrane Cellular Component |
| KEGG gene cross-reference | ath:AT5G67030 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF01548DEDD_Tnp_IS11015-50 aaPF01494FAD_binding_331-63 aaPF21925XRCC4_C35-80 aaPF13738Pyr_redox_343-60 aaPF19762DUF624947-106 aaPF01548DEDD_Tnp_IS11051-111 aaPF05185PRMT564-116 aaPF07942CARME64-105 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA02G045990 | PF01548 | DEDD_Tnp_IS110 | 15 | 50 | 0.14 | 12.7 |
| TkA02G045990 | PF01494 | FAD_binding_3 | 31 | 63 | 0.064 | 13.2 |
| TkA02G045990 | PF21925 | XRCC4_C | 35 | 80 | 0.25 | 12.6 |
| TkA02G045990 | PF13738 | Pyr_redox_3 | 43 | 60 | 0.65 | 9.9 |
| TkA02G045990 | PF19762 | DUF6249 | 47 | 106 | 0.24 | 12.1 |
| TkA02G045990 | PF01548 | DEDD_Tnp_IS110 | 51 | 111 | 0.14 | 12.7 |
| TkA02G045990 | PF05185 | PRMT5 | 64 | 116 | 0.021 | 15.4 |
| TkA02G045990 | PF07942 | CARME | 64 | 105 | 0.023 | 14.7 |
| TkA02G045990 | PF00857 | Isochorismatase | 68 | 137 | 0.16 | 12.8 |
| TkA02G045990 | PF01262 | AlaDh_PNT_C | 79 | 117 | 0.034 | 14.3 |
| TkA02G045990 | PF01494 | FAD_binding_3 | 81 | 140 | 0.064 | 13.2 |
| TkA02G045990 | PF01266 | DAO | 82 | 113 | 0.00052 | 20.4 |
| TkA02G045990 | PF07992 | Pyr_redox_2 | 82 | 111 | 0.014 | 15.6 |
| TkA02G045990 | PF03486 | HI0933_like | 82 | 115 | 0.017 | 15.4 |
| TkA02G045990 | PF00070 | Pyr_redox | 82 | 112 | 0.12 | 13.7 |
| TkA02G045990 | PF00890 | FAD_binding_2 | 83 | 112 | 0.00014 | 21.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.