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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA02G044450
Reference: TK1151 Chr: Chr02 Coordinates: 11462171-11462562 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

348 bp · TkA02G044450|TK1151|cDNA

AGCGGGATTGGAAAACTGGAAGAGGGAAACCAAAATATTTCAATCTTCATTGCCCTAGCTCGCAAGCCGCAGCCTCGCACACAACACAGAACACTCAACTCCCGTTCTCTGCCTCTCTCTAACTCTCAGCGCCTCAGGCCACCTGCGAGCTGCTCCGATCTCGCCTCCCCTGACCTCGCCTCCCCCGACCTCGGATCAGGTAACAAATACATACACCTATCTGTCTCTATAACAACATATTCAACCCCGACCTCAGAAGT...

348 bp · TkA02G044450|TK1151|CDS

AGCGGGATTGGAAAACTGGAAGAGGGAAACCAAAATATTTCAATCTTCATTGCCCTAGCTCGCAAGCCGCAGCCTCGCACACAACACAGAACACTCAACTCCCGTTCTCTGCCTCTCTCTAACTCTCAGCGCCTCAGGCCACCTGCGAGCTGCTCCGATCTCGCCTCCCCTGACCTCGCCTCCCCCGACCTCGGATCAGGTAACAAATACATACACCTATCTGTCTCTATAACAACATATTCAACCCCGACCTCAGAAGT...

115 aa · TkA02G044450|TK1151|PROTEIN

SGIGKLEEGNQNISIFIALARKPQPRTQHRTLNSRSLPLSNSQRLRPPASCSDLASPDLASPDLGSGNKYIHLSVSITTYSTPTSEVSTAGPRSSTSHHRRLFKLVIDVSPSSPV

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G044450
TK1151 IDTkA02G044450
OH-1004 IDLXL04_020587
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)92.900
Protein coverage (%)TK1151 35.652 / OH-1004 13.816
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G044450
LocationChr02:11462171-11462562 (-)
DescriptionSimilar to ELD1: Glycosyltransferase-like KOBITO 1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_020587 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0009416 response to light stimulus Biological Process
GO:0009663 plasmodesma organization Biological Process
GO:0009737 response to abscisic acid Biological Process
GO:0009738 abscisic acid-activated signaling pathway Biological Process
GO:0009749 response to glucose Biological Process
GO:0009826 unidimensional cell growth Biological Process
GO:0009831 plant-type cell wall modification involved in multidimensional cell growth Biological Process
GO:0010078 maintenance of root meristem identity Biological Process
GO:0010215 cellulose microfibril organization Biological Process
GO:0030154 cell differentiation Biological Process
GO:0030244 cellulose biosynthetic process Biological Process
GO:0051301 cell division Biological Process
KEGG gene cross-reference
ath:AT2G41451
ath:AT3G08550
ath:AT3G57200
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.567
Rank 1 · TkA02G044450 · TK1151
Cytoplasm0.399
Rank 2 · TkA02G044450 · TK1151
Cell membrane0.109
Rank 3 · TkA02G044450 · TK1151
Endoplasmic reticulum0.068
Rank 4 · TkA02G044450 · TK1151
Mitochondrion0.033
Rank 5 · TkA02G044450 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

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