Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1067 bp · TkA01G641230|TK1151|cDNA
GCCATCACTTCACATTTACCAAGAAGAACCGACAACGGGATTAAGAATTTCTGGAATTCTCATCTACGAAAGCGGAATCCCGGCCTTCAAACCAATCTACCTTCCAATTCAACAGATAATAAAGTAGAAGCTAAAGCTGAAGCGAAGCTATCCATGGATCCGATGAGTGTCAGCAATAACTTCCTCCATGAATGTTGTTCTAGCGATGGAGAAGCTTTTCAGAAACATATGGCGTATGGTATCCAAAACCCTATAAAGAT...
441 bp · TkA01G641230|TK1151|CDS
GCCATCACTTCACATTTACCAAGAAGAACCGACAACGGGATTAAGAATTTCTGGAATTCTCATCTACGAAAGCGGAATCCCGGCCTTCAAACCAATCTACCTTCCAATTCAACAGATAATAAAGTAGAAGCTAAAGCTGAAGCGAAGCTATCCATGGATCCGATGAGTGTCAGCAATAACTTCCTCCATGAATGTTGTTCTAGCGATGGAGAAGCTTTTCAGAAACATATGGCGTATGGTATCCAAAACCCTATAAAGAT...
Protein
Download Protein FASTA146 aa · TkA01G641230|TK1151|PROTEIN
AITSHLPRRTDNGIKNFWNSHLRKRNPGLQTNLPSNSTDNKVEAKAEAKLSMDPMSVSNNFLHECCSSDGEAFQKHMAYGIQNPIKIESDYFVTVQEGPNSTSESCDQSVKEEMMNGSESQNSYDSDITVDLLIDFPNDGEYLQYV
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA01G641230 |
|---|---|
| TK1151 ID | TkA01G641230 |
| OH-1004 ID | LXL04_021663 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 42.400 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 57.430Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA01G641230 |
|---|---|
| Location | Chr01:162270357-162271638 (+) |
| Description | Similar to MYB17: Transcription factor MYB17 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisRiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0000902 cell morphogenesis Biological Process GO:0006351 DNA-templated transcription Biological Process GO:0009737 response to abscisic acid Biological Process GO:0009825 multidimensional cell growth Biological Process GO:0009908 flower development Biological Process GO:0009909 regulation of flower development Biological Process GO:0010091 trichome branching Biological Process GO:0010143 cutin biosynthetic process Biological Process GO:0045892 negative regulation of DNA-templated transcription Biological Process GO:0080090 regulation of primary metabolic process Biological Process GO:0080091 regulation of raffinose metabolic process Biological Process GO:1901957 regulation of cutin biosynthetic process Biological Process |
| KEGG gene cross-reference | ath:AT3G01140 ath:AT3G61250 ath:AT4G05100 ath:AT4G28110 ath:AT5G15310 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00249Myb_DNA-binding2-22 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA01G641230 | PF00249 | Myb_DNA-binding | 2 | 22 | 0.0019 | 19.0 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.