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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA01G640850
Reference: TK1151 Chr: Chr01 Coordinates: 162188799-162190685 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1824 bp · TkA01G640850|TK1151|cDNA

ATGCAACTTGTTTCTTCAAGGAGTTCGACTAATTACTCTTCGGGTTTCTACAAGCTCTTTTTTGACATAGATAGCATTCTTCGAATTCTTTATGATGGTCCAGAAACGACTACTGTTTTTTGGCCTAACCCGAGTATATTTTTACTAGATAGAAGATTCCTTTATAGAGATAATCGAAGTGCAAGTCTTGACTCCGATGGTCAATTCAACTCATCTGATGATGGTAATGTAAGAGTTTATAGTCTCGTGGAGGGCAAAGG...

CDS

Download CDS FASTA

1824 bp · TkA01G640850|TK1151|CDS

ATGCAACTTGTTTCTTCAAGGAGTTCGACTAATTACTCTTCGGGTTTCTACAAGCTCTTTTTTGACATAGATAGCATTCTTCGAATTCTTTATGATGGTCCAGAAACGACTACTGTTTTTTGGCCTAACCCGAGTATATTTTTACTAGATAGAAGATTCCTTTATAGAGATAATCGAAGTGCAAGTCTTGACTCCGATGGTCAATTCAACTCATCTGATGATGGTAATGTAAGAGTTTATAGTCTCGTGGAGGGCAAAGG...

Protein

Download Protein FASTA

607 aa · TkA01G640850|TK1151|PROTEIN

MQLVSSRSSTNYSSGFYKLFFDIDSILRILYDGPETTTVFWPNPSIFLLDRRFLYRDNRSASLDSDGQFNSSDDGNVRVYSLVEGKGRMRWEVQYQFLSNPCTIHGICGRNSLCTYSPNLGRQCACLHGYKMVNSEDWSNGCEPEFQPCTQHDCGFIELRHAEFYGYDFQLLINRTTNTCKKACLENNKCMGFQFGIRDDVGAHFCFLKSSLRNGYQMGINYLMYIKLPKTLVSNFNQQTESQSTSSCPSHAPVPIIRSY...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA01G640850
TK1151 IDTkA01G640850
OH-1004 IDLXL04_000021
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)96.300
Protein coverage (%)TK1151 100.000 / OH-1004 78.598
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA01G640850
LocationChr01:162188799-162190685 (-)
DescriptionSimilar to PK1: Putative receptor protein kinase ZmPK1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g34300 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300. No verified direct reference in this release
At4g00340 Serine/threonine-protein kinase. No verified direct reference in this release
At5g24080 G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0202500 Involved in resistance against the herbivorous insect brown planthopper (N.lugens, BPH). No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_000021 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006468 protein phosphorylation Biological Process
GO:0006952 defense response Biological Process
GO:0048544 recognition of pollen Biological Process
GO:0051707 response to other organism Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0016020 membrane Cellular Component
GO:0004672 protein kinase activity Molecular Function
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0005516 calmodulin binding Molecular Function
GO:0005524 ATP binding Molecular Function
KEGG gene cross-reference
ath:AT4G00340
ath:AT5G24080
dosa:Os04g0202350
dosa:Os04g0202500
osa:9266608
zma:542378
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.844
Rank 1 · TkA01G640850 · TK1151
Endoplasmic reticulum0.086
Rank 2 · TkA01G640850 · TK1151
Cytoplasm0.078
Rank 3 · TkA01G640850 · TK1151
Nucleus0.047
Rank 4 · TkA01G640850 · TK1151
Lysosome / Vacuole0.030
Rank 5 · TkA01G640850 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00954S_locus_glycop86-132 aa
PF12947EGF_3105-131 aa
PF14670FXa_inhibition106-133 aa
PF00024PAN_1154-212 aa
PF14295PAN_4163-195 aa
PF30217X92_C179-251 aa
PF10140YukC261-306 aa
PF07714PK_Tyr_Ser-Thr327-603 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA01G640850PF00954S_locus_glycop861322e-0525.8
TkA01G640850PF12947EGF_31051310.03215.2
TkA01G640850PF14670FXa_inhibition1061330.04314.7
TkA01G640850PF00024PAN_11542120.0009519.7
TkA01G640850PF14295PAN_41631950.004417.8
TkA01G640850PF30217X92_C1792510.09812.8
TkA01G640850PF10140YukC2613060.310.6
TkA01G640850PF07714PK_Tyr_Ser-Thr3276038.9e-39134.1
TkA01G640850PF00069Pkinase3286023.5e-48165.0
TkA01G640850PF03109ABC13363550.02114.7
TkA01G640850PF03109ABC13924730.02114.7
TkA01G640850PF10140YukC4374730.310.6
TkA01G640850PF03109ABC15625910.02114.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9XID3Arabidopsis thalianasp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g3430032.100%Swiss-ProtMedium
Q39203Arabidopsis thalianasp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-230.800%Swiss-ProtMedium
Q9FLV4Arabidopsis thalianasp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g2408031.300%Swiss-ProtMedium
Q0JEU6Oryza sativa subsp. japonicasp|Q0JEU6|LERK3_ORYSJ G-type lectin S-receptor-like serine/threonine-protein kinase LECRK332.900%Swiss-ProtMedium

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