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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA01G608630
Reference: TK1151 Chr: Chr01 Coordinates: 153426110-153432014 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

3750 bp · TkA01G608630|TK1151|cDNA

GCTAACGGGCCATAACTTAAAAACAAAAAAACAAAAATCCCCGTCAACTTTAACGAGCTGGAGCCCCAAAATTCAAACGCCCCCGTAACGGCCATAATTTTGAAGTCCCTTTCTTCATCATCTCACCTCATCCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTATATTTTAACCTAAAAATACTCACCATTTCCGTGAATTAACTCCATTTACACTGAATCTACCTTCGCTATACAGCAATTTGA...

CDS

Download CDS FASTA

3105 bp · TkA01G608630|TK1151|CDS

ATGGAGAGGAAGGGAGGAAACACGGTTCCGAGTTCACCATCGCACACCCCAAGGTCCACTGACAAATCAGTAAGAGATCTCCGACATGTAGAAGGAAATATGAGTGGTAAACACGATAAAGAAAAAGGCGTGAATGTTCAGGTTGTTGTGCGATGCAGACCAATGAACGCCGAAGAGGAGAAATTACACACACCGATGGTTATTACATGCTCAGAAAACAAGAGGGAAATATGCGCAATTCAGACTATAGCCAACAAGCA...

Protein

Download Protein FASTA

1034 aa · TkA01G608630|TK1151|PROTEIN

MERKGGNTVPSSPSHTPRSTDKSVRDLRHVEGNMSGKHDKEKGVNVQVVVRCRPMNAEEEKLHTPMVITCSENKREICAIQTIANKQIDRSFVFDKVFGPKSQQRDLYHSAVSPIVFEVLEGYNCTIFAYGQTGTGKTYTMEGGGRKKNGEFPSDAGVIPRAVKQIFDILEAQNAEYSMKVTFLELYNEEITDLLALEEASKYPEDKSKKPIALMEDGKGGVLVRGLEEEIVSTADEIYRILEKGSAKRRTAETLMNKQS...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA01G608630
TK1151 IDTkA01G608630
OH-1004 IDLXL04_000492
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)98.800
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA01G608630
LocationChr01:153426110-153432014 (+)
DescriptionSimilar to KIN5D: Kinesin-like protein KIN-5D
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g45850 Responsible for microtubule translocation. No verified direct reference in this release
At2g28620 Responsible for microtubule translocation. No verified direct reference in this release
At2g37420 Responsible for microtubule translocation. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os05g0117798 Responsible for microtubule translocation. No verified direct reference in this release
Os08g0558400 Responsible for microtubule translocation. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_000492 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0000281 mitotic cytokinesis Biological Process
GO:0000911 cytokinesis by cell plate formation Biological Process
GO:0007018 microtubule-based movement Biological Process
GO:0007052 mitotic spindle organization Biological Process
GO:0009826 unidimensional cell growth Biological Process
GO:0043622 cortical microtubule organization Biological Process
GO:0051231 spindle elongation Biological Process
GO:0090307 mitotic spindle assembly Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005819 spindle Cellular Component
GO:0005874 microtubule Cellular Component
GO:0005876 spindle microtubule Cellular Component
KEGG gene cross-reference
ath:AT2G28620
ath:AT2G37420
dosa:Os05g0117798
osa:9268593
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.743
Rank 1 · TkA01G608630 · TK1151
Nucleus0.226
Rank 2 · TkA01G608630 · TK1151
Cell membrane0.079
Rank 3 · TkA01G608630 · TK1151
Golgi apparatus0.072
Rank 4 · TkA01G608630 · TK1151
Mitochondrion0.059
Rank 5 · TkA01G608630 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF16796Microtub_bd45-195 aa
PF00225Kinesin51-387 aa
PF25524RSLD_CPSF6217-254 aa
PF29653YqxI235-254 aa
PF20667Sec10_N462-505 aa
PF20667Sec10_N462-520 aa
PF29653YqxI545-577 aa
PF20667Sec10_N567-607 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA01G608630PF16796Microtub_bd451951.2e-2797.5
TkA01G608630PF00225Kinesin513871e-116390.2
TkA01G608630PF25524RSLD_CPSF62172540.7910.7
TkA01G608630PF29653YqxI2352540.7911.2
TkA01G608630PF20667Sec10_N4625050.0116.6
TkA01G608630PF20667Sec10_N4625200.0116.6
TkA01G608630PF29653YqxI5455770.7911.2
TkA01G608630PF20667Sec10_N5676070.0116.6
TkA01G608630PF17511Mobilization_B5726236.67.8
TkA01G608630PF29653YqxI6176870.7911.2
TkA01G608630PF17511Mobilization_B6627166.67.8
TkA01G608630PF25524RSLD_CPSF66757110.7910.7
TkA01G608630PF20667Sec10_N6767350.0116.6
TkA01G608630PF16796Microtub_bd7157701.2e-2797.5
TkA01G608630PF00225Kinesin7448061e-116390.2
TkA01G608630PF25524RSLD_CPSF67818230.7910.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9LZU5Arabidopsis thalianasp|Q9LZU5|KN5D_ARATH Kinesin-like protein KIN-5D70.700%Swiss-ProtHigh
F4IIS5Arabidopsis thalianasp|F4IIS5|KN5A_ARATH Kinesin-like protein KIN-5A65.800%Swiss-ProtHigh
Q0WQJ7Arabidopsis thalianasp|Q0WQJ7|KN5B_ARATH Kinesin-like protein KIN-5B46.100%Swiss-ProtMedium
Q5W7C6Oryza sativa subsp. japonicasp|Q5W7C6|KN5A_ORYSJ Kinesin-like protein KIN-5A66.000%Swiss-ProtHigh
B7EJ91Oryza sativa subsp. japonicasp|B7EJ91|KN5C_ORYSJ Kinesin-like protein KIN-5C47.100%Swiss-ProtMedium

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