Gene Card
Gene overview
cDNA / CDS / Protein Sequences
590 bp · TkA01G482290|TK1151|cDNA
CGAAAGGATCTCTGGAGTTATCCTACAATATCTATTCAGGAACACTCCAATAAAATCTGGATCCGAGGACGATGAAGCAAGCGAGAAACAAAATTTTGATACGATTTGCTACTTCCATAGACACCATCAGGATTTGAATAGAATCAGAACGATAATCACTACATGAACACAATGAGATACGACATGATTCGCATGCTGATTAGAGGATCCGAACATTCGCACACGCTGTGCGTTCACGCATGCCATGGATCCTCCGAGTT...
375 bp · TkA01G482290|TK1151|CDS
ATGAACACAATGAGATACGACATGATTCGCATGCTGATTAGAGGATCCGAACATTCGCACACGCTGTGCGTTCACGCATGCCATGGATCCTCCGAGTTCCATGTTTATTCGAAGAAAGGCTGGGTATCGTTTCTCCCTGAGAAAGATGCATTGATCATCACCATTGGTGATCAGTTGCAGAGATTGAGTGAGGGAAGATATAAGCATGTTATCGGGAGGCCATTCTTTAAAGGGGAAGAGGATTGTATTACAATGGCTTT...
Protein
Download Protein FASTA124 aa · TkA01G482290|TK1151|PROTEIN
MNTMRYDMIRMLIRGSEHSHTLCVHACHGSSEFHVYSKKGWVSFLPEKDALIITIGDQLQRLSEGRYKHVIGRPFFKGEEDCITMAFLCNPSPTKMKIKRKTISLGHQTLFFFILVLFYQLFCN
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA01G482290 |
|---|---|
| TK1151 ID | TkA01G482290 |
| OH-1004 ID | LXL04_002120 |
| Relationship / confidence | Sequence Supported Annotation Or Model Conflict / Review |
| Protein identity (%) | 98.200 |
| Protein coverage (%) | TK1151 91.129 / OH-1004 31.044Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA01G482290 |
|---|---|
| Location | Chr01:120753461-120754639 (+) |
| Description | Similar to 1-aminocyclopropane-1-carboxylate oxidase 1 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0009416 response to light stimulus Biological Process GO:0009686 gibberellin biosynthetic process Biological Process GO:0009693 ethylene biosynthetic process Biological Process GO:0009739 response to gibberellin Biological Process GO:0009740 gibberellic acid mediated signaling pathway Biological Process GO:0009835 fruit ripening Biological Process GO:0045487 gibberellin catabolic process Biological Process GO:0048366 leaf development Biological Process GO:0048575 short-day photoperiodism, flowering Biological Process GO:0071398 cellular response to fatty acid Biological Process GO:0005737 cytoplasm Cellular Component GO:0009507 chloroplast Cellular Component |
| KEGG gene cross-reference | ath:AT1G78440 ath:AT1G80330 ath:AT4G25420 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF031712OG-FeII_Oxy25-71 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA01G482290 | PF03171 | 2OG-FeII_Oxy | 25 | 71 | 1.2e-05 | 26.3 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.