Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1286 bp · TkA01G458970|TK1151|cDNA
CACACACTAAAACACGCTGAAAACACACACACACACATACACAAATATGACGGTTTCCTTGAAGACGTTTGGATGGCTTGTAGCAGGGTTATGTTTCATGGTCCTGAATAGAGGAGAATGTATGATTTCCAAGAGTTTACTGAAAGAAATTAATAAGGTAAACGAGATTGGTTCATATGGTATTGTCGTGCCCAATAGCTTCGAAATGAATCCACTTTTGGAGTCCCCGAGCTTCATAGCAAATAAAAAACGTCCCTATA...
1074 bp · TkA01G458970|TK1151|CDS
ATGACGGTTTCCTTGAAGACGTTTGGATGGCTTGTAGCAGGGTTATGTTTCATGGTCCTGAATAGAGGAGAATGTATGATTTCCAAGAGTTTACTGAAAGAAATTAATAAGGTAAACGAGATTGGTTCATATGGTATTGTCGTGCCCAATAGCTTCGAAATGAATCCACTTTTGGAGTCCCCGAGCTTCATAGCAAATAAAAAACGTCCCTATATTGACATTTCAGGAAGAAGATTTCGTATAGGAACTCTAGAAAACCA...
Protein
Download Protein FASTA357 aa · TkA01G458970|TK1151|PROTEIN
MTVSLKTFGWLVAGLCFMVLNRGECMISKSLLKEINKVNEIGSYGIVVPNSFEMNPLLESPSFIANKKRPYIDISGRRFRIGTLENQRVIIVMTGLGMLNSGITTQLLLSLFNVKGILHFGIAGNANTEFEIGDVVIPEFWAHTGLWVWQRYGEGSQNELPLESNGDYTRNIGYLKFSDYNNDTTTQHNQDKDNLLNNVWYQPEEIFPINTTPETRQHSFWVPVDNNYFSLSKQLEGMKLERCINGTICLPREPKVARVE...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA01G458970 |
|---|---|
| TK1151 ID | TkA01G458970 |
| OH-1004 ID | LXL04_032489 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 56.400 |
| Protein coverage (%) | TK1151 89.076 / OH-1004 30.214Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA01G458970 |
|---|---|
| Location | Chr01:114938248-114942030 (-) |
| Description | Similar to BSPA: Bark storage protein A |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006334 nucleosome assembly Biological Process GO:0006351 DNA-templated transcription Biological Process GO:0006357 regulation of transcription by RNA polymerase II Biological Process GO:0009116 nucleoside metabolic process Biological Process GO:0009164 nucleoside catabolic process Biological Process GO:0019284 L-methionine salvage from S-adenosylmethionine Biological Process GO:0019509 L-methionine salvage from methylthioadenosine Biological Process GO:0000781 chromosome, telomeric region Cellular Component GO:0000785 chromatin Cellular Component GO:0000786 nucleosome Cellular Component GO:0005634 nucleus Cellular Component GO:0005730 nucleolus Cellular Component |
| KEGG gene cross-reference | ath:AT1G49950 bha:BH1279 zma:542683 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF01048PNP_UDP_144-139 aaPF01048PNP_UDP_1268-344 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA01G458970 | PF01048 | PNP_UDP_1 | 44 | 139 | 5.6e-30 | 105.2 |
| TkA01G458970 | PF01048 | PNP_UDP_1 | 268 | 344 | 5.6e-30 | 105.2 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.