Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1971 bp · TkA01G162350|TK1151|cDNA
ATGCATCCTTGTGTCTTCATAGTTTTCTCACTTCTCTTGCTCTGTCTTGAGGCTACAACTACTGGCAACCAATTGTTGGTAGCAATGAGAGGAGCAGATAATACTAATGTTGTTATGAACAAGTGTCTGGATAAAGAGAGACATGCTCTCCTTCATTTTAAAACTCATTTTCAAGACCTCGATGGTTGTCTCTCTACATGGGCAACTGAAGAAGATGAGTGTTGTAAATGGTTTGGAGTCACGTGTGACAATAAAACAGG...
1971 bp · TkA01G162350|TK1151|CDS
ATGCATCCTTGTGTCTTCATAGTTTTCTCACTTCTCTTGCTCTGTCTTGAGGCTACAACTACTGGCAACCAATTGTTGGTAGCAATGAGAGGAGCAGATAATACTAATGTTGTTATGAACAAGTGTCTGGATAAAGAGAGACATGCTCTCCTTCATTTTAAAACTCATTTTCAAGACCTCGATGGTTGTCTCTCTACATGGGCAACTGAAGAAGATGAGTGTTGTAAATGGTTTGGAGTCACGTGTGACAATAAAACAGG...
Protein
Download Protein FASTA656 aa · TkA01G162350|TK1151|PROTEIN
MHPCVFIVFSLLLLCLEATTTGNQLLVAMRGADNTNVVMNKCLDKERHALLHFKTHFQDLDGCLSTWATEEDECCKWFGVTCDNKTGHVTRLEISMCASLGEISDSLLNLSYLTHLELSFTYFHGTIPAEFGNLTNLETLVLQDVGWCRVDNLEWLSHLSQLEELVMDGISLAKVNNWVDVVLSLRKLSFLSLNGCDLSQVMYPYSSFSNSSLSIHTLYLENNHLNSSMYHWLFPLTSNKLSDLDLSSNMLDEIPKYLGN...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA01G162350 |
|---|---|
| TK1151 ID | TkA01G162350 |
| OH-1004 ID | LXL04_004356 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 58.200 |
| Protein coverage (%) | TK1151 95.732 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA01G162350 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr01:41481471-41484236 (+) | |||||||||
| Description | Similar to EIX2: Receptor-like protein EIX2 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0002220 innate immune response activating cell surface receptor signaling pathway Biological Process GO:0006898 receptor-mediated endocytosis Biological Process GO:0007165 signal transduction Biological Process GO:0010073 meristem maintenance Biological Process GO:0016045 detection of bacterium Biological Process GO:0042742 defense response to bacterium Biological Process GO:0050832 defense response to fungus Biological Process GO:0052544 defense response by callose deposition in cell wall Biological Process GO:0140426 pathogen-associated molecular pattern receptor signaling pathway Biological Process GO:0005576 extracellular region Cellular Component GO:0005768 endosome Cellular Component GO:0005886 plasma membrane Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT1G71400 ath:AT4G04220 ath:AT5G46330 sly:543900 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF08263LRRNT_244-83 aaPF23211LRR_LRWD185-197 aaPF00560LRR_189-110 aaPF13855LRR_889-143 aaPF23952LRR_EndoS90-116 aaPF23598LRR_1499-288 aaPF24758LRR_At5g56370103-170 aaPF00560LRR_1113-134 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA01G162350 | PF08263 | LRRNT_2 | 44 | 83 | 2.4e-10 | 41.2 |
| TkA01G162350 | PF23211 | LRR_LRWD1 | 85 | 197 | 0.0034 | 17.9 |
| TkA01G162350 | PF00560 | LRR_1 | 89 | 110 | 2.3e-29 | 95.8 |
| TkA01G162350 | PF13855 | LRR_8 | 89 | 143 | 2.9e-23 | 82.1 |
| TkA01G162350 | PF23952 | LRR_EndoS | 90 | 116 | 0.0022 | 18.9 |
| TkA01G162350 | PF23598 | LRR_14 | 99 | 288 | 6.4e-24 | 85.1 |
| TkA01G162350 | PF24758 | LRR_At5g56370 | 103 | 170 | 3.1e-05 | 24.5 |
| TkA01G162350 | PF00560 | LRR_1 | 113 | 134 | 2.3e-29 | 95.8 |
| TkA01G162350 | PF12799 | LRR_4 | 113 | 143 | 1.1e-18 | 67.6 |
| TkA01G162350 | PF12799 | LRR_4 | 135 | 169 | 1.1e-18 | 67.6 |
| TkA01G162350 | PF23952 | LRR_EndoS | 148 | 197 | 0.0022 | 18.9 |
| TkA01G162350 | PF13855 | LRR_8 | 155 | 198 | 2.9e-23 | 82.1 |
| TkA01G162350 | PF12799 | LRR_4 | 162 | 199 | 1.1e-18 | 67.6 |
| TkA01G162350 | PF00560 | LRR_1 | 187 | 200 | 2.3e-29 | 95.8 |
| TkA01G162350 | PF12799 | LRR_4 | 188 | 225 | 1.1e-18 | 67.6 |
| TkA01G162350 | PF27087 | LRR_TMOD-LMOD | 204 | 234 | 9.0 | 6.6 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.