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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA01G133000
Reference: TK1151 Chr: Chr01 Coordinates: 33705836-33706941 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

951 bp · TkA01G133000|TK1151|cDNA

ATGACTGGATGGCGTGGAGTCACATGCGACAATGAAACTGGGCATGTCACAAACTTGCAAGAGCTTTGCCTTCAAGATGTTAGAAGATGCAGCATTGAGAAGTCGGAGTGGTTGTCTGATCTCTCTCATTTGAAGAAACTTTGGATCAAGGGGATTTCCCTAGCCAAAGCAGATCATTGGGAAGATATGATTTCTAGTCTCCCAAAACTATTTGATTTAAGGTTAGATGGATGTGAGCTCTCACTGGTCATGTATCCATA...

CDS

Download CDS FASTA

951 bp · TkA01G133000|TK1151|CDS

ATGACTGGATGGCGTGGAGTCACATGCGACAATGAAACTGGGCATGTCACAAACTTGCAAGAGCTTTGCCTTCAAGATGTTAGAAGATGCAGCATTGAGAAGTCGGAGTGGTTGTCTGATCTCTCTCATTTGAAGAAACTTTGGATCAAGGGGATTTCCCTAGCCAAAGCAGATCATTGGGAAGATATGATTTCTAGTCTCCCAAAACTATTTGATTTAAGGTTAGATGGATGTGAGCTCTCACTGGTCATGTATCCATA...

Protein

Download Protein FASTA

316 aa · TkA01G133000|TK1151|PROTEIN

MTGWRGVTCDNETGHVTNLQELCLQDVRRCSIEKSEWLSDLSHLKKLWIKGISLAKADHWEDMISSLPKLFDLRLDGCELSLVMYPYSSFLNSSSSIYLLSLQNNNLNSSMYHWMFPLTNNKLFNLDLSNNKLDGIPKYLDPKNPSLRYLVLSHNQFNGSISEKLLELPRLETLRVSFNNLRVPSTYRLSSFSHSHLTTLDLPNNGYSDTTPPEFWVMWPSQLRHLDVSSNNITRKVPGLFLKFSNKSEIDLSSNNFYGP...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA01G133000
TK1151 IDTkA01G133000
OH-1004 IDLXL04_004573
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)47.500
Protein coverage (%)TK1151 89.241 / OH-1004 43.484
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA01G133000
LocationChr01:33705836-33706941 (-)
DescriptionSimilar to EIX2: Receptor-like protein EIX2
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g40170 Receptor-like protein 54. No verified direct reference in this release
At3g13380 Receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates.
BRL1 and BRL3 are novel brassinosteroid receptors that function in vascular differentiation in Arabidopsis.2004 · DOI: 10.1242/dev.01403
At1g58190 Receptor-like protein 9a. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_004573 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0002220 innate immune response activating cell surface receptor signaling pathway Biological Process
GO:0050832 defense response to fungus Biological Process
GO:0005886 plasma membrane Cellular Component
KEGG gene cross-referenceNo functional description available
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.743
Rank 1 · TkA01G133000 · TK1151
Endoplasmic reticulum0.122
Rank 2 · TkA01G133000 · TK1151
Nucleus0.077
Rank 3 · TkA01G133000 · TK1151
Cytoplasm0.073
Rank 4 · TkA01G133000 · TK1151
Extracellular0.066
Rank 5 · TkA01G133000 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF23598LRR_1410-129 aa
PF14580LRR_915-68 aa
PF12799LRR_417-51 aa
PF00560LRR_118-32 aa
PF13855LRR_818-80 aa
PF00560LRR_170-81 aa
PF13855LRR_894-133 aa
PF00560LRR_199-109 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA01G133000PF23598LRR_14101290.0007619.1
TkA01G133000PF14580LRR_915680.01615.5
TkA01G133000PF12799LRR_417512.3e-1350.6
TkA01G133000PF00560LRR_118327.5e-1861.5
TkA01G133000PF13855LRR_818805.6e-1555.6
TkA01G133000PF00560LRR_170817.5e-1861.5
TkA01G133000PF13855LRR_8941335.6e-1555.6
TkA01G133000PF00560LRR_1991097.5e-1861.5
TkA01G133000PF12799LRR_41001082.3e-1350.6
TkA01G133000PF13516LRR_61001089.6e-0626.0
TkA01G133000PF14580LRR_91161900.01615.5
TkA01G133000PF13516LRR_61201349.6e-0626.0
TkA01G133000PF00560LRR_11231387.5e-1861.5
TkA01G133000PF13855LRR_81231815.6e-1555.6
TkA01G133000PF12799LRR_41231622.3e-1350.6
TkA01G133000PF13516LRR_61431599.6e-0626.0

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
F4KHA2Arabidopsis thalianasp|F4KHA2|RLP54_ARATH Receptor-like protein 5430.100%Swiss-ProtMedium
Q9LJF3Arabidopsis thalianasp|Q9LJF3|BRL3_ARATH Receptor-like protein kinase BRI1-like 327.400%Swiss-ProtLow
F4I9S3Arabidopsis thalianasp|F4I9S3|RLP9A_ARATH Receptor-like protein 9a29.200%Swiss-ProtLow

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