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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA01G119900
Reference: TK1151 Chr: Chr01 Coordinates: 30385108-30386176 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

468 bp · TkA01G119900|TK1151|cDNA

GGCTGGCTCGAAGCATTTGCTGCGCATCCCCAAATCGGGCAAAATCCTTCTTCAGTTGCTCACAAAAGTTCCACAAGTGCTCAGTTACATCTCCAATTCTCTCTCTTTTTTTTTCTATCATCCAATCAGCTAGAGAGCAATTCTTTTTTCTTTCTACAGCTCAACCGAACGGAAGCTATCTGCGTTGTGCTTAAATCAATGGCTGTTTATAAAATCAACACAGTTATCGGACCTGCTCTTGTAGGCAAGGACCCAACTGA...

468 bp · TkA01G119900|TK1151|CDS

GGCTGGCTCGAAGCATTTGCTGCGCATCCCCAAATCGGGCAAAATCCTTCTTCAGTTGCTCACAAAAGTTCCACAAGTGCTCAGTTACATCTCCAATTCTCTCTCTTTTTTTTTCTATCATCCAATCAGCTAGAGAGCAATTCTTTTTTCTTTCTACAGCTCAACCGAACGGAAGCTATCTGCGTTGTGCTTAAATCAATGGCTGTTTATAAAATCAACACAGTTATCGGACCTGCTCTTGTAGGCAAGGACCCAACTGA...

155 aa · TkA01G119900|TK1151|PROTEIN

GWLEAFAAHPQIGQNPSSVAHKSSTSAQLHLQFSLFFFLSSNQLESNSFFFLQLNRTEAICVVLKSMAVYKINTVIGPALVGKDPTDQTGIDNFILQQVHEHGWCSRNLGANATMAVSTALCKAGAGVLNIPLYQVIINIICNPLWLCLTQLLLL

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA01G119900
TK1151 IDTkA01G119900
OH-1004 IDLXL04_032393
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)96.200
Protein coverage (%)TK1151 67.097 / OH-1004 46.429
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA01G119900
LocationChr01:30385108-30386176 (-)
DescriptionSimilar to ENO1: Enolase 1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_032393 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006096 glycolytic process Biological Process
GO:0000015 phosphopyruvate hydratase complex Cellular Component
GO:0000287 magnesium ion binding Molecular Function
GO:0004634 phosphopyruvate hydratase activity Molecular Function
KEGG gene cross-reference
rcu:8288376
sly:544068
zma:542316
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.382
Rank 1 · TkA01G119900 · TK1151
Nucleus0.344
Rank 2 · TkA01G119900 · TK1151
Mitochondrion0.167
Rank 3 · TkA01G119900 · TK1151
Endoplasmic reticulum0.138
Rank 4 · TkA01G119900 · TK1151
Cell membrane0.124
Rank 5 · TkA01G119900 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF03952Enolase_N67-137 aa
PF02746MR_MLE_N71-137 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA01G119900PF03952Enolase_N671374e-1453.7
TkA01G119900PF02746MR_MLE_N711370.02715.4

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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