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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

LXL04_032393
Reference: OH-1004 Chr: Chr07 Coordinates: 21710627-21712548 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

798 bp · LXL04_032393|LXL04_032393|OH1004|cDNA

ATGTTGATGTTCATGGCTGGCTCGAAGCATTTGCTGCGCATCCCCAAATCGGGCAAAATCCTTCTTCAGTTGCTCACAAAAGTTCCACAAGTGCTCAGTTACATCTCCaattctctctctcttttttttctATCATCCAATCAGCTAGAGAGCAATTCTTTTTTCTTCCTACAGCTCAACCGAACGGAAGCTATCTGCGTTGTGCTTAAATCAATGGCTGTTGATAAAATCAACACAGTTATCGGACCTGCTCTTGTAGG...

675 bp · LXL04_032393|LXL04_032393|OH1004|CDS

ATGTTGATGTTCATGGCTGGCTCGAAGCATTTGCTGCGCATCCCCAAATCGGGCAAAATCCTTCTTCAGTTGCTCACAAAAGTTCCACAAGTGCTCAGTTACATCTCCAATTCTCTCTCTCTTTTTTTTCTATCATCCAATCAGCTAGAGAGCAATTCTTTTTTCTTCCTACAGCTCAACCGAACGGAAGCTATCTGCGTTGTGCTTAAATCAATGGCTGTTGATAAAATCAACACAGTTATCGGACCTGCTCTTGTAGG...

224 aa · LXL04_032393|LXL04_032393|OH1004|PROTEIN

MLMFMAGSKHLLRIPKSGKILLQLLTKVPQVLSYISNSLSLFFLSSNQLESNSFFFLQLNRTEAICVVLKSMAVDKINTVIGPALVGKDPTDQTGIDNFILQQVHEHGWCSRNLGANATMAVSTALCKAGAGVLNIPLYQHIANLEFAVLPVGADSFKEAMGMGSVVKKKFGQDATNVGDEGGFSPKFQEYKEVLEVLETVIDEAGYTGKVLIGIDVADMGSCS

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDLXL04_032393
Source versionOH-1004 / GCA_047496595.1_OSU_TarKok_2.0
SNP / Indel variants and carrier samplesCRA009020 · OH-1004

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Basic Information and Functional Annotation

Gene IDLXL04_032393
LocationChr07:21710627-21712548 (-)
DescriptionSimilar to ENO1: Enolase 1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_032393 · GCA_047496595.1_OSU_TarKok_2.0.

GO annotations (OH1004 source)
GO:0006096 glycolytic process Biological Process
GO:0000015 phosphopyruvate hydratase complex Cellular Component
GO:0000287 magnesium ion binding Molecular Function
GO:0004634 phosphopyruvate hydratase activity Molecular Function
KEGG gene cross-reference
rcu:8288376
sly:544068
zma:542316
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.380
Rank 1 · LXL04_032393 · OH-1004
Nucleus0.202
Rank 2 · LXL04_032393 · OH-1004
Mitochondrion0.184
Rank 3 · LXL04_032393 · OH-1004
Plastid0.130
Rank 4 · LXL04_032393 · OH-1004
Extracellular0.101
Rank 5 · LXL04_032393 · OH-1004

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF03952.22Enolase_N72-142 aa
PF00113.29Enolase_C142-218 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
LXL04_032393PF03952.22Enolase_N721428e-1555.9
LXL04_032393PF00113.29Enolase_C1422182.1e-2177.2

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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