Gene Card
Gene overview
cDNA / CDS / Protein Sequences
411 bp · TkA01G008730|TK1151|cDNA
ATGGAAAAGGAATTGGAATTGGAAAATGAATCTGTCAGGAAAAGGAATCCAATTCCATATGCTGTTTGGTTGGCAGGAAAAGGAATTGGAATTAATTCCATAGTCTGTTTGGTTTGCAGGAAATGGAATTGGAATTCATATAAAATTCCAGAATTGCCCTTCTTATGTGTTTTGTTTAATTTTCTTGTGTGTTATTTCCAGTTCCTGTTTTACAGTGTTCATACATGTTTATACAGGGAGATCATGATTTATGTACAAGT...
411 bp · TkA01G008730|TK1151|CDS
ATGGAAAAGGAATTGGAATTGGAAAATGAATCTGTCAGGAAAAGGAATCCAATTCCATATGCTGTTTGGTTGGCAGGAAAAGGAATTGGAATTAATTCCATAGTCTGTTTGGTTTGCAGGAAATGGAATTGGAATTCATATAAAATTCCAGAATTGCCCTTCTTATGTGTTTTGTTTAATTTTCTTGTGTGTTATTTCCAGTTCCTGTTTTACAGTGTTCATACATGTTTATACAGGGAGATCATGATTTATGTACAAGT...
Protein
Download Protein FASTA136 aa · TkA01G008730|TK1151|PROTEIN
MEKELELENESVRKRNPIPYAVWLAGKGIGINSIVCLVCRKWNWNSYKIPELPFLCVLFNFLVCYFQFLFYSVHTCLYREIMIYVQVEYRILFIQGEITNCSYREKSRIVHQGRNHELFIKAEITNCSSRFQTVHT
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA01G008730 |
|---|---|
| TK1151 ID | TkA01G008730 |
| OH-1004 ID | LXL04_019883 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 85.200 |
| Protein coverage (%) | TK1151 39.706 / OH-1004 5.212Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA01G008730 |
|---|---|
| Location | Chr01:2330050-2330460 (-) |
| Description | Similar to PLT4: Probable polyol transporter 4 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0010311 lateral root formation Biological Process GO:0019761 glucosinolate biosynthetic process Biological Process GO:0005886 plasma membrane Cellular Component GO:0009507 chloroplast Cellular Component GO:0016020 membrane Cellular Component GO:0090406 pollen tube Cellular Component GO:0004497 monooxygenase activity Molecular Function GO:0004499 N,N-dimethylaniline monooxygenase activity Molecular Function GO:0005351 carbohydrate:proton symporter activity Molecular Function GO:0005354 galactose transmembrane transporter activity Molecular Function GO:0005365 myo-inositol transmembrane transporter activity Molecular Function GO:0015145 monosaccharide transmembrane transporter activity Molecular Function |
| KEGG gene cross-reference | ath:AT1G62560 ath:AT2G16120 ath:AT2G16130 ath:AT2G20780 ath:AT3G18830 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF14178YppF89-112 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA01G008730 | PF14178 | YppF | 89 | 112 | 0.22 | 12.2 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.