Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2664 bp · LXL04_030532|LXL04_030532|OH1004|cDNA
ATGCAGCGAATCGTTGACAACTTTCTCGCTGTCACAAAAGAATCTGTGAAGACCATTACTTATGAAATATTAAGTAACATAGTACGGCTTATCAATGGAATATCCGCACTATTGCTATCTATATTACCTGGCAAAGCCAGTATTCTTGAAGGAATGCAAGGTTGGGAGCTCAAACCAAAATTACGTGGCCCTCGATTGCCACGTTGGATGGAAGATGGGGTGTCATCATTTAATCACATGATTCACGAACTATCGGTGGA...
2664 bp · LXL04_030532|LXL04_030532|OH1004|CDS
ATGCAGCGAATCGTTGACAACTTTCTCGCTGTCACAAAAGAATCTGTGAAGACCATTACTTATGAAATATTAAGTAACATAGTACGGCTTATCAATGGAATATCCGCACTATTGCTATCTATATTACCTGGCAAAGCCAGTATTCTTGAAGGAATGCAAGGTTGGGAGCTCAAACCAAAATTACGTGGCCCTCGATTGCCACGTTGGATGGAAGATGGGGTGTCATCATTTAATCACATGATTCACGAACTATCGGTGGA...
Protein
Download Protein FASTA887 aa · LXL04_030532|LXL04_030532|OH1004|PROTEIN
MQRIVDNFLAVTKESVKTITYEILSNIVRLINGISALLLSILPGKASILEGMQGWELKPKLRGPRLPRWMEDGVSSFNHMIHELSVEYDSAPSVEYSSGEDLDDYDDAYVYPASPMTPYSKFSRQPSFTKRERSRAHWILSIIMFFLIPARLLFGIPFYVIRTIFRRGGRSTVSSPGRAKTSQAAKKGIDHVVQRATDKRRGIVEDLHMGIEICIETVFDGIHYATRFVLSPFESIRMLLRWFFSRSMGKPRPDEPGTSV...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_030532 |
|---|---|
| TK1151 ID | TkA07G410020 |
| OH-1004 ID | LXL04_030532 |
| Relationship / confidence | Rbh Sequence Supported / Probable |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 99.853 / OH-1004 76.437Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_030532 |
|---|---|
| Location | Chr06:118182482-118188401 (+) |
| Description | Similar to Lipn: Lipase member N |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006108 malate metabolic process Biological Process GO:0006629 lipid metabolic process Biological Process GO:0016042 lipid catabolic process Biological Process GO:0005576 extracellular region Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005764 lysosome Cellular Component GO:0043202 lysosomal lumen Cellular Component GO:0004771 sterol ester esterase activity Molecular Function GO:0004806 triacylglycerol lipase activity Molecular Function GO:0016298 lipase activity Molecular Function GO:0016615 malate dehydrogenase activity Molecular Function |
| KEGG gene cross-reference | bta:281283 cel:CELE_F54F3.3 cfa:403867 mmu:70166 rno:50682 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF04083.23Abhydro_lipase291-345 aaPF12146.16Hydrolase_4423-500 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_030532 | PF04083.23 | Abhydro_lipase | 291 | 345 | 2.8e-15 | 56.3 |
| LXL04_030532 | PF12146.16 | Hydrolase_4 | 423 | 500 | 1.8e-06 | 28.2 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.