Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1014 bp · LXL04_010155|LXL04_010155|OH1004|cDNA
ATGAAAGCTGTAGTGATCACAACTCCGGGAGGTCCAGAAGTTCTGAAACTGCTAGAAGTAGAAGAGCCTAAACTCACAGACAATGAAGTATTGATCAGAGTGGAAGCCACGGCTCTTAACAGAGCTGATACGCTTCAACGCCAAGGAAAGTACCCTCCGCCAAAAGGCGACAGTGAATATCCAGGTCTAGAGTGTTCCGGAACCATCGAACAAGTAGGCAAAAACGTATCTCGTTGGAAAATTGGGGACCAGGCGAATAA...
1014 bp · LXL04_010155|LXL04_010155|OH1004|CDS
ATGAAAGCTGTAGTGATCACAACTCCGGGAGGTCCAGAAGTTCTGAAACTGCTAGAAGTAGAAGAGCCTAAACTCACAGACAATGAAGTATTGATCAGAGTGGAAGCCACGGCTCTTAACAGAGCTGATACGCTTCAACGCCAAGGAAAGTACCCTCCGCCAAAAGGCGACAGTGAATATCCAGGTCTAGAGTGTTCCGGAACCATCGAACAAGTAGGCAAAAACGTATCTCGTTGGAAAATTGGGGACCAGGCGAATAA...
Protein
Download Protein FASTA337 aa · LXL04_010155|LXL04_010155|OH1004|PROTEIN
MKAVVITTPGGPEVLKLLEVEEPKLTDNEVLIRVEATALNRADTLQRQGKYPPPKGDSEYPGLECSGTIEQVGKNVSRWKIGDQANKLMADMSGILVCVLISGGGYAEKVAVPAGQVLPIPSGVSLKDAASFPEVACTVWSTVFMTSKLSSGETFLIHGGSSGIGTFAIQMAKYLGVKVFVTAGSEEKLKACKELGADVCINYKTEDFVARVKEETGGKGVDVILDNIGGAYFQKNLESLGMDGRLFIIGFMGGVKAEAN...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_010155 |
|---|---|
| TK1151 ID | TkA03G508270 |
| OH-1004 ID | LXL04_010155 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 96.100 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_010155 |
|---|---|
| Location | Chr02:141233140-141234993 (-) |
| Description | Similar to TP53I3: Quinone oxidoreductase PIG3 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0042178 xenobiotic catabolic process Biological Process GO:0048255 mRNA stabilization Biological Process GO:0051289 protein homotetramerization Biological Process GO:1901662 quinone catabolic process Biological Process GO:1903409 reactive oxygen species biosynthetic process Biological Process GO:0005829 cytosol Cellular Component GO:0003730 mRNA 3'-UTR binding Molecular Function GO:0003960 quinone reductase (NADPH) activity Molecular Function GO:0008270 zinc ion binding Molecular Function GO:0016651 oxidoreductase activity, acting on NAD(P)H Molecular Function GO:0042802 identical protein binding Molecular Function GO:0050661 NADP binding Molecular Function |
| KEGG gene cross-reference | cpoc:100135507 hsa:9540 mmu:12972 rno:362061 vda:VDAG_08652 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF08240.18ADH_N27-121 aaPF00107.33ADH_zinc_N163-278 aaPF13602.13ADH_zinc_N_2195-335 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_010155 | PF08240.18 | ADH_N | 27 | 121 | 6.2e-17 | 62.5 |
| LXL04_010155 | PF00107.33 | ADH_zinc_N | 163 | 278 | 7.7e-33 | 113.9 |
| LXL04_010155 | PF13602.13 | ADH_zinc_N_2 | 195 | 335 | 5e-25 | 89.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.