Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1128 bp · LXL04_001260|LXL04_001260|OH1004|cDNA
ATGTTGAGACAATTTGAACTTTTCGGCCCATTATCTTGGGCCGTGGGCCTTGGGCAATGGTTCACAACTTCGCATGATAATTTGGAAGACAAGACAGTGGAGGCTTCTACTCGTTTGATGCCTATGACAGCTTCGACCGACCGCTTTAGAGTCACAACTCTTTCTCCCGTTTTCAAAATCGAAGCCGTCTTCACTCTTCAGTCTTCACTCTTCAAAATCGAAGCCGTCTTCGCCGTCGTCTTCACTCTTCAGTCTTCACT...
1128 bp · LXL04_001260|LXL04_001260|OH1004|CDS
ATGTTGAGACAATTTGAACTTTTCGGCCCATTATCTTGGGCCGTGGGCCTTGGGCAATGGTTCACAACTTCGCATGATAATTTGGAAGACAAGACAGTGGAGGCTTCTACTCGTTTGATGCCTATGACAGCTTCGACCGACCGCTTTAGAGTCACAACTCTTTCTCCCGTTTTCAAAATCGAAGCCGTCTTCACTCTTCAGTCTTCACTCTTCAAAATCGAAGCCGTCTTCGCCGTCGTCTTCACTCTTCAGTCTTCACT...
Protein
Download Protein FASTA375 aa · LXL04_001260|LXL04_001260|OH1004|PROTEIN
MLRQFELFGPLSWAVGLGQWFTTSHDNLEDKTVEASTRLMPMTASTDRFRVTTLSPVFKIEAVFTLQSSLFKIEAVFAVVFTLQSSLFTIVSHLRCISHLAASRISSVFTNSHLASAQETQLQASIIMASTGELLATSHSSISISNYRSLSWTQGHHRHSCYKLYPKSSPNSTRIFSLKTTHDLFLYRPITIKHHSRNVITRSVVPEKPPTSLSADFVQPTELQPDNTGGGGSGGEGSDNNWGGSGGGGGGDGGGASDES...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_001260 |
|---|---|
| TK1151 ID | TkA01G550470 |
| OH-1004 ID | LXL04_001260 |
| Relationship / confidence | Rbh Below Probable Coverage Or Synteny Threshold / Review |
| Protein identity (%) | 96.100 |
| Protein coverage (%) | TK1151 31.098 / OH-1004 13.600Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_001260 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr01:23073317-23075667 (+) | |||||||||
| Description | Similar to FAX2: Protein FATTY ACID EXPORT 2, chloroplastic | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006783 heme biosynthetic process Biological Process GO:0006839 mitochondrial transport Biological Process GO:0015908 fatty acid transport Biological Process GO:0070453 regulation of heme biosynthetic process Biological Process GO:0005739 mitochondrion Cellular Component GO:0005743 mitochondrial inner membrane Cellular Component GO:0005829 cytosol Cellular Component GO:0009507 chloroplast Cellular Component GO:0009536 plastid Cellular Component GO:0009706 chloroplast inner membrane Cellular Component GO:0009941 chloroplast envelope Cellular Component GO:0031966 mitochondrial membrane Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT2G26240 ath:AT3G43520 hsa:51522 pon:100190858 rno:171432 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF03647.19Tmemb_14276-366 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_001260 | PF03647.19 | Tmemb_14 | 276 | 366 | 1.5e-19 | 71.2 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.