Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00424
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 13
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00424The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00424 |
ChrUn:10149463-10460948 | Chr09:15099785-15440418 | + | 13 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 13 · Showing 1–13 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkAUNG037140 | LXL04_037573 | JCVI_TKOH_00424 | 99.4 | 100.0 / 100.0 | Review |
TkAUNG037440 | LXL04_037574 | JCVI_TKOH_00424 | 98.0 | 100.0 / 100.0 | Review |
TkAUNG037460 | LXL04_037575 | JCVI_TKOH_00424 | 70.1 | 91.803 / 99.485 | Review |
TkAUNG037550 | LXL04_037577 | JCVI_TKOH_00424 | 95.1 | 97.921 / 86.27 | Complex |
TkAUNG037560 | LXL04_037577 | JCVI_TKOH_00424 | 52.3 | 87.571 / 34.426 | Complex |
TkAUNG037920 | LXL04_037578 | JCVI_TKOH_00424 | 98.8 | 100.0 / 100.0 | Complex |
TkAUNG037940 | LXL04_037579 | JCVI_TKOH_00424 | 99.7 | 98.182 / 100.0 | Review |
TkAUNG038000 | LXL04_037581 | JCVI_TKOH_00424 | 100.0 | 53.472 / 22.985 | Complex |
TkAUNG038180 | LXL04_037583 | JCVI_TKOH_00424 | 99.4 | 92.647 / 26.185 | Review |
TkAUNG038190 | LXL04_037582 | JCVI_TKOH_00424 | 100.0 | 89.63 / 65.405 | Complex |
TkAUNG038250 | LXL04_037586 | JCVI_TKOH_00424 | 96.0 | 100.0 / 72.754 | Complex |
TkAUNG038260 | LXL04_037584 | JCVI_TKOH_00424 | 100.0 | 100.0 / 100.0 | Complex |
TkAUNG038430 | LXL04_037586 | JCVI_TKOH_00424 | 99.7 | 100.0 / 100.0 | Review |