同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00373
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 12
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00373

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00373 ChrUn 11460753-11719325 Chr01 68825391-69249707 mixed High 12 anchors
ChrUn 11460753-11719325 Chr01 68825391-69249707 JCVI_TKOH_00373 · 12 gene pairs TkAUNG041190 | LXL04_003147 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkAUNG041210 | LXL04_003148 | 96.2% | RBH_high_identity_coverage_synteny | Strict TkAUNG041430 | LXL04_003144 | 99.1% | multi_source_to_OH1004 | Complex TkAUNG041440 | LXL04_003143 | 99.6% | RBH_below_probable_coverage_or_synteny_threshold | Review TkAUNG041510 | LXL04_003142 | 96.8% | sequence_supported_annotation_or_model_conflict | Review TkAUNG041530 | LXL04_003141 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkAUNG041800 | LXL04_003135 | 93.8% | multi_source_to_OH1004 | Complex TkAUNG041820 | LXL04_003133 | 99.3% | sequence_supported_annotation_or_model_conflict | Review TkAUNG042010 | LXL04_003136 | 100.0% | multi_source_to_OH1004 | Complex TkAUNG042050 | LXL04_003135 | 94.4% | multi_source_to_OH1004 | Complex TkAUNG042070 | LXL04_003133 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkAUNG042140 | LXL04_003131 | 100.0% | RBH_high_identity_coverage_synteny | Strict
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00373 ChrUn:11460753-11719325 Chr01:68825391-69249707 mixed 12 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 12 · 当前范围 1–12 · 页码 1/1

TkAUNG041190 → LXL04_003147
100.0%
TkAUNG041210 → LXL04_003148
96.2%
TkAUNG041430 → LXL04_003144
99.1%
TkAUNG041440 → LXL04_003143
99.6%
TkAUNG041510 → LXL04_003142
96.8%
TkAUNG041530 → LXL04_003141
100.0%
TkAUNG041800 → LXL04_003135
93.8%
TkAUNG041820 → LXL04_003133
99.3%
TkAUNG042010 → LXL04_003136
100.0%
TkAUNG042050 → LXL04_003135
94.4%
TkAUNG042070 → LXL04_003133
100.0%
TkAUNG042140 → LXL04_003131
100.0%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkAUNG041190LXL04_003147JCVI_TKOH_00373100.087.619 / 41.256待复核
TkAUNG041210LXL04_003148JCVI_TKOH_0037396.297.706 / 81.765Strict
TkAUNG041430LXL04_003144JCVI_TKOH_0037399.1100.0 / 100.0Complex
TkAUNG041440LXL04_003143JCVI_TKOH_0037399.6100.0 / 100.0待复核
TkAUNG041510LXL04_003142JCVI_TKOH_0037396.899.367 / 55.282待复核
TkAUNG041530LXL04_003141JCVI_TKOH_00373100.089.524 / 51.934待复核
TkAUNG041800LXL04_003135JCVI_TKOH_0037393.8100.0 / 100.0Complex
TkAUNG041820LXL04_003133JCVI_TKOH_0037399.399.32 / 58.871待复核
TkAUNG042010LXL04_003136JCVI_TKOH_00373100.0100.0 / 79.062Complex
TkAUNG042050LXL04_003135JCVI_TKOH_0037394.4100.0 / 100.0Complex
TkAUNG042070LXL04_003133JCVI_TKOH_00373100.099.32 / 58.871待复核
TkAUNG042140LXL04_003131JCVI_TKOH_00373100.0100.0 / 100.0Strict