Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00270
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 18
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00270The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00270 |
Chr06:17164389-17877534 | Chr05:109890511-110772704 | mixed | 18 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 18 · Showing 1–18 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA06G063610 | LXL04_025328 | JCVI_TKOH_00270 | 93.5 | 84.466 / 33.333 | Review |
TkA06G063640 | LXL04_025331 | JCVI_TKOH_00270 | 83.2 | 100.0 / 70.74 | Review |
TkA06G063960 | LXL04_025333 | JCVI_TKOH_00270 | 96.0 | 100.0 / 100.0 | Strict |
TkA06G063970 | LXL04_025334 | JCVI_TKOH_00270 | 100.0 | 100.0 / 100.0 | Strict |
TkA06G064150 | LXL04_025336 | JCVI_TKOH_00270 | 100.0 | 86.17 / 74.654 | Probable |
TkA06G064250 | LXL04_025337 | JCVI_TKOH_00270 | 98.8 | 32.762 / 26.3 | Review |
TkA06G064270 | LXL04_025339 | JCVI_TKOH_00270 | 81.2 | 100.0 / 100.0 | Review |
TkA06G064430 | LXL04_025343 | JCVI_TKOH_00270 | 100.0 | 77.344 / 37.643 | Review |
TkA06G064630 | LXL04_025345 | JCVI_TKOH_00270 | 99.6 | 100.0 / 100.0 | Strict |
TkA06G065040 | LXL04_025348 | JCVI_TKOH_00270 | 98.2 | 100.0 / 97.126 | Complex |
TkA06G065050 | LXL04_025349 | JCVI_TKOH_00270 | 90.6 | 100.0 / 100.0 | Complex |
TkA06G065060 | LXL04_025350 | JCVI_TKOH_00270 | 100.0 | 100.0 / 100.0 | Complex |
TkA06G065080 | LXL04_025351 | JCVI_TKOH_00270 | 98.1 | 100.0 / 100.0 | Strict |
TkA06G065090 | LXL04_025355 | JCVI_TKOH_00270 | 100.0 | 96.178 / 24.121 | Review |
TkA06G065220 | LXL04_025355 | JCVI_TKOH_00270 | 99.5 | 100.0 / 100.0 | Complex |
TkA06G066550 | LXL04_025366 | JCVI_TKOH_00270 | 91.9 | 100.0 / 100.0 | Probable |
TkA06G066560 | LXL04_025367 | JCVI_TKOH_00270 | 100.0 | 100.0 / 100.0 | Strict |
TkA06G066620 | LXL04_025376 | JCVI_TKOH_00270 | 74.4 | 59.722 / 98.851 | Review |