Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00121
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 18
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00121The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00121 |
Chr03:353132-1116709 | Chr02:382267-1093659 | mixed | 18 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 18 · Showing 1–18 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA03G001310 | LXL04_006018 | JCVI_TKOH_00121 | 99.0 | 100.0 / 100.0 | Review |
TkA03G001870 | LXL04_006023 | JCVI_TKOH_00121 | 99.9 | 100.0 / 100.0 | Strict |
TkA03G001880 | LXL04_006024 | JCVI_TKOH_00121 | 97.7 | 100.0 / 100.0 | Strict |
TkA03G002440 | LXL04_006031 | JCVI_TKOH_00121 | 100.0 | 64.0 / 64.0 | Review |
TkA03G002460 | LXL04_006032 | JCVI_TKOH_00121 | 100.0 | 88.971 / 94.902 | Strict |
TkA03G003060 | LXL04_006034 | JCVI_TKOH_00121 | 100.0 | 23.153 / 28.659 | Review |
TkA03G003170 | LXL04_006035 | JCVI_TKOH_00121 | 100.0 | 100.0 / 95.944 | Strict |
TkA03G003190 | LXL04_006036 | JCVI_TKOH_00121 | 89.9 | 100.0 / 88.449 | Review |
TkA03G003270 | LXL04_006037 | JCVI_TKOH_00121 | 99.7 | 100.0 / 100.0 | Strict |
TkA03G003280 | LXL04_006038 | JCVI_TKOH_00121 | 81.1 | 76.923 / 29.371 | Review |
TkA03G003380 | LXL04_006040 | JCVI_TKOH_00121 | 98.7 | 100.0 / 100.0 | Strict |
TkA03G003780 | LXL04_006042 | JCVI_TKOH_00121 | 100.0 | 100.0 / 100.0 | Strict |
TkA03G003830 | LXL04_006043 | JCVI_TKOH_00121 | 100.0 | 100.0 / 100.0 | Strict |
TkA03G003850 | LXL04_006045 | JCVI_TKOH_00121 | 99.6 | 99.194 / 95.72 | Strict |
TkA03G003980 | LXL04_006046 | JCVI_TKOH_00121 | 100.0 | 100.0 / 100.0 | Strict |
TkA03G004460 | LXL04_006049 | JCVI_TKOH_00121 | 99.5 | 100.0 / 75.686 | Complex |
TkA03G004720 | LXL04_006050 | JCVI_TKOH_00121 | 98.0 | 100.0 / 99.674 | Complex |
TkA03G004730 | LXL04_006051 | JCVI_TKOH_00121 | 100.0 | 100.0 / 100.0 | Complex |