同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00033
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 40
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00033

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00033 Chr01 114816376-116125925 Chr01 49457621-50905232 mixed High 40 anchors
Chr01 114816376-116125925 Chr01 49457621-50905232 JCVI_TKOH_00033 · 40 gene pairs TkA01G458490 | LXL04_002532 | 99.5% | RBH_high_identity_coverage_synteny | Strict TkA01G458700 | LXL04_002531 | 96.8% | sequence_supported_annotation_or_model_conflict | Review TkA01G458720 | LXL04_002531 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA01G458750 | LXL04_002531 | 99.7% | RBH_high_identity_coverage_synteny | Strict TkA01G458760 | LXL04_002530 | 96.9% | multi_source_to_OH1004 | Complex TkA01G458770 | LXL04_002529 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA01G458790 | LXL04_002528 | 99.9% | RBH_high_identity_coverage_synteny | Strict TkA01G458800 | LXL04_002527 | 91.7% | RBH_sequence_supported | Probable TkA01G458840 | LXL04_002526 | 99.0% | multi_source_to_OH1004 | Complex TkA01G458950 | LXL04_002525 | 99.4% | RBH_high_identity_coverage_synteny | Strict TkA01G459090 | LXL04_002524 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA01G459190 | LXL04_002522 | 97.5% | RBH_sequence_supported | Probable
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00033 Chr01:114816376-116125925 Chr01:49457621-50905232 mixed 40 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 40 · 当前范围 1–40 · 页码 1/1

TkA01G458490 → LXL04_002532
99.5%
TkA01G458700 → LXL04_002531
96.8%
TkA01G458720 → LXL04_002531
100.0%
TkA01G458750 → LXL04_002531
99.7%
TkA01G458760 → LXL04_002530
96.9%
TkA01G458770 → LXL04_002529
100.0%
TkA01G458790 → LXL04_002528
99.9%
TkA01G458800 → LXL04_002527
91.7%
TkA01G458840 → LXL04_002526
99.0%
TkA01G458950 → LXL04_002525
99.4%
TkA01G459090 → LXL04_002524
100.0%
TkA01G459190 → LXL04_002522
97.5%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA01G458490LXL04_002532JCVI_TKOH_0003399.5100.0 / 100.0Strict
TkA01G458700LXL04_002531JCVI_TKOH_0003396.899.2 / 10.992待复核
TkA01G458720LXL04_002531JCVI_TKOH_00033100.089.241 / 12.601待复核
TkA01G458750LXL04_002531JCVI_TKOH_0003399.7100.0 / 93.923Strict
TkA01G458760LXL04_002530JCVI_TKOH_0003396.9100.0 / 100.0Complex
TkA01G458770LXL04_002529JCVI_TKOH_00033100.0100.0 / 100.0Strict
TkA01G458790LXL04_002528JCVI_TKOH_0003399.998.446 / 100.0Strict
TkA01G458800LXL04_002527JCVI_TKOH_0003391.7100.0 / 83.558Probable
TkA01G458840LXL04_002526JCVI_TKOH_0003399.0100.0 / 100.0Complex
TkA01G458950LXL04_002525JCVI_TKOH_0003399.4100.0 / 100.0Strict
TkA01G459090LXL04_002524JCVI_TKOH_00033100.0100.0 / 100.0Strict
TkA01G459190LXL04_002522JCVI_TKOH_0003397.584.885 / 73.653Probable
TkA01G459240LXL04_002521JCVI_TKOH_0003398.19.012 / 6.574待复核
TkA01G459420LXL04_002520JCVI_TKOH_0003396.0100.0 / 95.533Complex
TkA01G459430LXL04_002519JCVI_TKOH_0003399.3100.0 / 100.0Strict
TkA01G459440LXL04_002520JCVI_TKOH_0003374.287.574 / 54.639Complex
TkA01G459550LXL04_002515JCVI_TKOH_0003383.4100.0 / 100.0待复核
TkA01G459640LXL04_002514JCVI_TKOH_00033100.0100.0 / 100.0Complex
TkA01G459660LXL04_002513JCVI_TKOH_0003399.099.414 / 44.454待复核
TkA01G459680LXL04_002513JCVI_TKOH_0003397.3100.0 / 51.266待复核
TkA01G459930LXL04_002509JCVI_TKOH_0003390.198.182 / 72.36Probable
TkA01G460860LXL04_002502JCVI_TKOH_0003399.9100.0 / 100.0Strict
TkA01G460870LXL04_002501JCVI_TKOH_0003399.791.733 / 98.006Strict
TkA01G461100LXL04_002498JCVI_TKOH_0003391.188.596 / 99.02Complex
TkA01G461360LXL04_002494JCVI_TKOH_0003394.9100.0 / 100.0Probable
TkA01G461410LXL04_002493JCVI_TKOH_0003397.575.769 / 86.784Complex
TkA01G461430LXL04_002490JCVI_TKOH_00033100.082.967 / 56.767Complex
TkA01G461740LXL04_002490JCVI_TKOH_0003399.382.967 / 56.767Complex
TkA01G461750LXL04_002487JCVI_TKOH_0003399.196.328 / 99.706Strict
TkA01G461770LXL04_002486JCVI_TKOH_00033100.0100.0 / 87.751Strict
TkA01G462240LXL04_002485JCVI_TKOH_00033100.0100.0 / 100.0Complex
TkA01G462330LXL04_002484JCVI_TKOH_00033100.0100.0 / 92.414待复核
TkA01G462350LXL04_002482JCVI_TKOH_0003399.5100.0 / 100.0Complex
TkA01G462710LXL04_002480JCVI_TKOH_00033100.098.883 / 36.722待复核
TkA01G462720LXL04_002480JCVI_TKOH_00033100.066.854 / 24.689Complex
TkA01G463010LXL04_002478JCVI_TKOH_00033100.0100.0 / 100.0Complex
TkA01G463030LXL04_002477JCVI_TKOH_0003399.6100.0 / 100.0Strict
TkA01G463050LXL04_002476JCVI_TKOH_0003398.3100.0 / 82.353Complex
TkA01G463430LXL04_002474JCVI_TKOH_0003395.099.371 / 34.632待复核
TkA01G463440LXL04_002474JCVI_TKOH_00033100.080.508 / 20.563Complex