同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00205
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 53
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00205

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00205 Chr04 113720042-115587767 Chr09 46720997-48942450 mixed High 53 anchors
Chr04 113720042-115587767 Chr09 46720997-48942450 JCVI_TKOH_00205 · 53 gene pairs TkA04G451490 | LXL04_038628 | 98.1% | multi_candidate_from_TK1151 | Complex TkA04G451970 | LXL04_038632 | 99.8% | RBH_high_identity_coverage_synteny | Strict TkA04G452040 | LXL04_038633 | 98.8% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA04G452080 | LXL04_038634 | 76.7% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA04G452240 | LXL04_038636 | 99.3% | RBH_sequence_supported | Probable TkA04G452370 | LXL04_038637 | 99.0% | multi_source_to_OH1004 | Complex TkA04G452420 | LXL04_038639 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA04G452570 | LXL04_038642 | 98.5% | sequence_supported_annotation_or_model_conflict | Review TkA04G452590 | LXL04_038643 | 99.2% | RBH_high_identity_coverage_synteny | Strict TkA04G452630 | LXL04_038644 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA04G453030 | LXL04_038648 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA04G453040 | LXL04_038649 | 78.2% | RBH_below_probable_coverage_or_synteny_threshold | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00205 Chr04:113720042-115587767 Chr09:46720997-48942450 mixed 53 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 53 · 当前范围 1–53 · 页码 1/1

TkA04G451490 → LXL04_038628
98.1%
TkA04G451970 → LXL04_038632
99.8%
TkA04G452040 → LXL04_038633
98.8%
TkA04G452080 → LXL04_038634
76.7%
TkA04G452240 → LXL04_038636
99.3%
TkA04G452370 → LXL04_038637
99.0%
TkA04G452420 → LXL04_038639
100.0%
TkA04G452570 → LXL04_038642
98.5%
TkA04G452590 → LXL04_038643
99.2%
TkA04G452630 → LXL04_038644
100.0%
TkA04G453030 → LXL04_038648
100.0%
TkA04G453040 → LXL04_038649
78.2%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA04G451490LXL04_038628JCVI_TKOH_0020598.1100.0 / 100.0Complex
TkA04G451970LXL04_038632JCVI_TKOH_0020599.8100.0 / 100.0Strict
TkA04G452040LXL04_038633JCVI_TKOH_0020598.8100.0 / 63.158待复核
TkA04G452080LXL04_038634JCVI_TKOH_0020576.744.397 / 93.064待复核
TkA04G452240LXL04_038636JCVI_TKOH_0020599.397.857 / 78.137Probable
TkA04G452370LXL04_038637JCVI_TKOH_0020599.0100.0 / 99.398Complex
TkA04G452420LXL04_038639JCVI_TKOH_00205100.0100.0 / 100.0Strict
TkA04G452570LXL04_038642JCVI_TKOH_0020598.5100.0 / 30.979待复核
TkA04G452590LXL04_038643JCVI_TKOH_0020599.2100.0 / 100.0Strict
TkA04G452630LXL04_038644JCVI_TKOH_00205100.0100.0 / 100.0Strict
TkA04G453030LXL04_038648JCVI_TKOH_00205100.0100.0 / 100.0Strict
TkA04G453040LXL04_038649JCVI_TKOH_0020578.2100.0 / 100.0待复核
TkA04G453190LXL04_038650JCVI_TKOH_0020598.799.359 / 80.729Complex
TkA04G453400LXL04_038652JCVI_TKOH_0020599.4100.0 / 21.166待复核
TkA04G453450LXL04_038661JCVI_TKOH_0020578.2100.0 / 31.7Complex
TkA04G453560LXL04_038650JCVI_TKOH_0020596.498.81 / 86.458待复核
TkA04G453570LXL04_038661JCVI_TKOH_0020581.893.191 / 37.176Complex
TkA04G453840LXL04_038661JCVI_TKOH_00205100.0100.0 / 16.138待复核
TkA04G453850LXL04_038661JCVI_TKOH_0020594.298.496 / 100.0Probable
TkA04G453990LXL04_038663JCVI_TKOH_00205100.0100.0 / 97.093Strict
TkA04G454050LXL04_038664JCVI_TKOH_0020599.596.087 / 87.008Complex
TkA04G454350LXL04_038670JCVI_TKOH_00205100.095.578 / 65.962Complex
TkA04G454370LXL04_038672JCVI_TKOH_00205100.0100.0 / 100.0Strict
TkA04G454420LXL04_038673JCVI_TKOH_0020598.9100.0 / 81.157Strict
TkA04G454730LXL04_038677JCVI_TKOH_0020596.2100.0 / 100.0Strict
TkA04G454830LXL04_038678JCVI_TKOH_00205100.0100.0 / 100.0Strict
TkA04G454850LXL04_038679JCVI_TKOH_0020565.598.75 / 83.798待复核
TkA04G454940LXL04_038680JCVI_TKOH_0020587.598.773 / 65.248待复核
TkA04G455030LXL04_038683JCVI_TKOH_0020589.0100.0 / 100.0Complex
TkA04G455540LXL04_038685JCVI_TKOH_00205100.0100.0 / 53.689待复核
TkA04G455550LXL04_038686JCVI_TKOH_0020598.8100.0 / 100.0Strict
TkA04G455570LXL04_038688JCVI_TKOH_0020592.0100.0 / 100.0Complex
TkA04G455700LXL04_038727JCVI_TKOH_00205100.0100.0 / 100.0Strict
TkA04G455740LXL04_038726JCVI_TKOH_0020599.1100.0 / 100.0待复核
TkA04G455840LXL04_038725JCVI_TKOH_0020599.7100.0 / 100.0Complex
TkA04G455950LXL04_038722JCVI_TKOH_0020595.993.989 / 26.108待复核
TkA04G456060LXL04_038714JCVI_TKOH_0020561.696.69 / 94.159Complex
TkA04G456070LXL04_038720JCVI_TKOH_0020598.1100.0 / 100.0Strict
TkA04G456100LXL04_038717JCVI_TKOH_0020599.0100.0 / 100.0Strict
TkA04G456110LXL04_038716JCVI_TKOH_0020595.991.288 / 90.637Strict
TkA04G456120LXL04_038715JCVI_TKOH_0020598.4100.0 / 100.0待复核
TkA04G456600LXL04_038714JCVI_TKOH_0020599.5100.0 / 100.0Complex
TkA04G456610LXL04_038712JCVI_TKOH_00205100.077.632 / 100.0Complex
TkA04G456630LXL04_038711JCVI_TKOH_0020590.2100.0 / 100.0Complex
TkA04G456810LXL04_038710JCVI_TKOH_0020591.880.882 / 100.0Complex
TkA04G456840LXL04_038709JCVI_TKOH_0020597.0100.0 / 87.713Complex
TkA04G457740LXL04_038706JCVI_TKOH_0020598.4100.0 / 100.0Strict
TkA04G457760LXL04_038705JCVI_TKOH_0020598.2100.0 / 100.0Complex
TkA04G458110LXL04_038709JCVI_TKOH_0020599.5100.0 / 87.713Complex
TkA04G458150LXL04_038710JCVI_TKOH_0020590.983.333 / 100.0Complex
TkA04G458210LXL04_038711JCVI_TKOH_0020590.7100.0 / 100.0Complex
TkA04G458260LXL04_038712JCVI_TKOH_0020594.577.181 / 100.0Complex
TkA04G458280LXL04_038714JCVI_TKOH_00205100.0100.0 / 65.654Complex