同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00004
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 266
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00004

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00004 Chr01 7986373-20414648 Chr01 156617442-169107166 mixed High 66 anchors
Chr01 7986373-20414648 Chr01 156617442-169107166 JCVI_TKOH_00004 · 266 gene pairs TkA01G071160 | LXL04_005267 | 82.7% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G071450 | LXL04_005263 | 71.6% | multi_source_to_OH1004 | Complex TkA01G071470 | LXL04_005262 | 98.2% | RBH_high_identity_coverage_synteny | Strict TkA01G071610 | LXL04_005260 | 99.4% | multi_source_to_OH1004 | Complex TkA01G071770 | LXL04_005259 | 99.5% | RBH_high_identity_coverage_synteny | Strict TkA01G071830 | LXL04_005258 | 99.9% | multi_source_to_OH1004 | Complex TkA01G071950 | LXL04_005256 | 97.8% | RBH_high_identity_coverage_synteny | Strict TkA01G072170 | LXL04_005255 | 98.5% | sequence_supported_annotation_or_model_conflict | Review TkA01G072320 | LXL04_005253 | 98.2% | RBH_high_identity_coverage_synteny | Strict TkA01G072350 | LXL04_005251 | 96.8% | multi_source_to_OH1004 | Complex TkA01G072670 | LXL04_005244 | 100.0% | RBH_sequence_supported | Probable TkA01G073300 | LXL04_005248 | 99.7% | sequence_supported_annotation_or_model_conflict | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00004 Chr01:7986373-20414648 Chr01:156617442-169107166 mixed 266 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 266 · 当前范围 201–266 · 页码 2/2

TkA01G071160 → LXL04_005267
82.7%
TkA01G071450 → LXL04_005263
71.6%
TkA01G071470 → LXL04_005262
98.2%
TkA01G071610 → LXL04_005260
99.4%
TkA01G071770 → LXL04_005259
99.5%
TkA01G071830 → LXL04_005258
99.9%
TkA01G071950 → LXL04_005256
97.8%
TkA01G072170 → LXL04_005255
98.5%
TkA01G072320 → LXL04_005253
98.2%
TkA01G072350 → LXL04_005251
96.8%
TkA01G072670 → LXL04_005244
100.0%
TkA01G073300 → LXL04_005248
99.7%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA01G071160LXL04_005267JCVI_TKOH_0000482.7100.0 / 100.0待复核
TkA01G071450LXL04_005263JCVI_TKOH_0000471.6100.0 / 100.0Complex
TkA01G071470LXL04_005262JCVI_TKOH_0000498.298.667 / 100.0Strict
TkA01G071610LXL04_005260JCVI_TKOH_0000499.4100.0 / 100.0Complex
TkA01G071770LXL04_005259JCVI_TKOH_0000499.5100.0 / 100.0Strict
TkA01G071830LXL04_005258JCVI_TKOH_0000499.996.694 / 65.181Complex
TkA01G071950LXL04_005256JCVI_TKOH_0000497.8100.0 / 100.0Strict
TkA01G072170LXL04_005255JCVI_TKOH_0000498.596.286 / 59.541待复核
TkA01G072320LXL04_005253JCVI_TKOH_0000498.2100.0 / 100.0Strict
TkA01G072350LXL04_005251JCVI_TKOH_0000496.8100.0 / 100.0Complex
TkA01G072670LXL04_005244JCVI_TKOH_00004100.0100.0 / 77.358Probable
TkA01G073300LXL04_005248JCVI_TKOH_0000499.7100.0 / 52.441待复核
TkA01G073340LXL04_005249JCVI_TKOH_0000497.0100.0 / 100.0Complex
TkA01G073350LXL04_005250JCVI_TKOH_0000499.3100.0 / 100.0Strict
TkA01G073630LXL04_005214JCVI_TKOH_00004100.096.33 / 84.677Complex
TkA01G073650LXL04_005213JCVI_TKOH_00004100.0100.0 / 100.0Strict
TkA01G073780LXL04_005238JCVI_TKOH_0000499.7100.0 / 56.874待复核
TkA01G073790LXL04_005237JCVI_TKOH_00004100.0100.0 / 100.0Complex
TkA01G074040LXL04_005234JCVI_TKOH_0000499.0100.0 / 100.0待复核
TkA01G074120LXL04_005234JCVI_TKOH_0000496.099.833 / 99.833Complex
TkA01G074560LXL04_005233JCVI_TKOH_0000497.6100.0 / 100.0Strict
TkA01G074600LXL04_005232JCVI_TKOH_0000495.8100.0 / 83.828Strict
TkA01G074880LXL04_005223JCVI_TKOH_00004100.0100.0 / 100.0Complex
TkA01G075280LXL04_005222JCVI_TKOH_00004100.0100.0 / 55.496待复核
TkA01G075290LXL04_005221JCVI_TKOH_0000486.6100.0 / 51.867待复核
TkA01G075440LXL04_005215JCVI_TKOH_0000492.284.507 / 85.906Probable
TkA01G075520LXL04_005214JCVI_TKOH_00004100.096.33 / 84.677Complex
TkA01G075750LXL04_005212JCVI_TKOH_00004100.0100.0 / 92.647Strict
TkA01G075780LXL04_005211JCVI_TKOH_0000472.998.165 / 47.982待复核
TkA01G075810LXL04_005210JCVI_TKOH_00004100.099.18 / 50.207待复核
TkA01G076090LXL04_005207JCVI_TKOH_00004100.0100.0 / 100.0Strict
TkA01G076120LXL04_005204JCVI_TKOH_0000498.7100.0 / 100.0Strict
TkA01G076480LXL04_005200JCVI_TKOH_00004100.0100.0 / 70.968Complex
TkA01G076490LXL04_005199JCVI_TKOH_00004100.0100.0 / 100.0待复核
TkA01G076710LXL04_005198JCVI_TKOH_00004100.0100.0 / 100.0Strict
TkA01G076800LXL04_005197JCVI_TKOH_0000493.597.527 / 25.87Complex
TkA01G076870LXL04_005194JCVI_TKOH_0000495.990.654 / 45.972待复核
TkA01G077100LXL04_005197JCVI_TKOH_0000467.594.605 / 46.566待复核
TkA01G077160LXL04_005193JCVI_TKOH_00004100.0100.0 / 100.0Strict
TkA01G077320LXL04_005191JCVI_TKOH_00004100.097.368 / 77.487Probable
TkA01G077360LXL04_005190JCVI_TKOH_0000495.5100.0 / 97.61待复核
TkA01G077370LXL04_005189JCVI_TKOH_0000499.0100.0 / 100.0Strict
TkA01G077380LXL04_005188JCVI_TKOH_00004100.0100.0 / 100.0Strict
TkA01G077390LXL04_005187JCVI_TKOH_00004100.0100.0 / 100.0Complex
TkA01G077420LXL04_005184JCVI_TKOH_00004100.0100.0 / 100.0Complex
TkA01G077440LXL04_005183JCVI_TKOH_0000499.8100.0 / 100.0Strict
TkA01G077630LXL04_005182JCVI_TKOH_0000499.896.346 / 100.0Strict
TkA01G077810LXL04_005176JCVI_TKOH_0000480.2100.0 / 99.522Complex
TkA01G077970LXL04_005177JCVI_TKOH_0000497.4100.0 / 59.459待复核
TkA01G077980LXL04_005177JCVI_TKOH_00004100.073.759 / 17.568Complex
TkA01G078000LXL04_005176JCVI_TKOH_0000498.999.155 / 85.167待复核
TkA01G078010LXL04_005175JCVI_TKOH_0000499.6100.0 / 100.0Strict
TkA01G078210LXL04_005174JCVI_TKOH_00004100.099.698 / 99.849Strict
TkA01G078410LXL04_005171JCVI_TKOH_00004100.0100.0 / 100.0Strict
TkA01G078520LXL04_005170JCVI_TKOH_00004100.0100.0 / 100.0待复核
TkA01G078530LXL04_005169JCVI_TKOH_0000498.6100.0 / 99.887Strict
TkA01G078560LXL04_005167JCVI_TKOH_0000497.9100.0 / 100.0Strict
TkA01G078910LXL04_005165JCVI_TKOH_0000498.2100.0 / 100.0Strict
TkA01G078940LXL04_005164JCVI_TKOH_0000499.3100.0 / 100.0Strict
TkA01G079160LXL04_005162JCVI_TKOH_0000499.6100.0 / 39.655待复核
TkA01G079290LXL04_005159JCVI_TKOH_0000499.299.185 / 66.364待复核
TkA01G079300LXL04_005158JCVI_TKOH_00004100.0100.0 / 47.028待复核
TkA01G079320LXL04_005157JCVI_TKOH_0000497.098.039 / 41.737待复核
TkA01G079620LXL04_005156JCVI_TKOH_0000499.296.748 / 53.604待复核
TkA01G079720LXL04_005154JCVI_TKOH_0000457.496.296 / 53.226Complex
TkA01G079770LXL04_005153JCVI_TKOH_0000499.186.154 / 100.0Strict