Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00099
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 22
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00099The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00099 |
Chr02:158454419-158957576 | Chr03:14149-679210 | mixed | 22 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 22 · Showing 1–22 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA02G614480 | LXL04_011797 | JCVI_TKOH_00099 | 100.0 | 100.0 / 100.0 | Strict |
TkA02G614490 | LXL04_011798 | JCVI_TKOH_00099 | 93.8 | 57.312 / 71.429 | Review |
TkA02G614690 | LXL04_011801 | JCVI_TKOH_00099 | 99.7 | 100.0 / 99.564 | Strict |
TkA02G614730 | LXL04_011803 | JCVI_TKOH_00099 | 99.1 | 90.598 / 72.603 | Probable |
TkA02G614930 | LXL04_011805 | JCVI_TKOH_00099 | 100.0 | 100.0 / 100.0 | Strict |
TkA02G615080 | LXL04_011796 | JCVI_TKOH_00099 | 98.3 | 66.473 / 76.222 | Review |
TkA02G615310 | LXL04_011792 | JCVI_TKOH_00099 | 100.0 | 100.0 / 100.0 | Review |
TkA02G615790 | LXL04_011790 | JCVI_TKOH_00099 | 84.1 | 97.938 / 94.273 | Review |
TkA02G615810 | LXL04_011789 | JCVI_TKOH_00099 | 93.9 | 95.142 / 70.772 | Probable |
TkA02G615920 | LXL04_011786 | JCVI_TKOH_00099 | 100.0 | 33.813 / 36.434 | Review |
TkA02G616140 | LXL04_011783 | JCVI_TKOH_00099 | 97.5 | 100.0 / 100.0 | Strict |
TkA02G616150 | LXL04_011784 | JCVI_TKOH_00099 | 98.2 | 92.135 / 100.0 | Strict |
TkA02G616160 | LXL04_011782 | JCVI_TKOH_00099 | 99.7 | 100.0 / 100.0 | Strict |
TkA02G616170 | LXL04_011781 | JCVI_TKOH_00099 | 99.7 | 100.0 / 100.0 | Strict |
TkA02G616180 | LXL04_011780 | JCVI_TKOH_00099 | 98.5 | 100.0 / 100.0 | Complex |
TkA02G616230 | LXL04_011779 | JCVI_TKOH_00099 | 100.0 | 100.0 / 100.0 | Strict |
TkA02G616280 | LXL04_011778 | JCVI_TKOH_00099 | 98.8 | 99.13 / 45.059 | Review |
TkA02G616320 | LXL04_011777 | JCVI_TKOH_00099 | 100.0 | 100.0 / 100.0 | Complex |
TkA02G616330 | LXL04_011780 | JCVI_TKOH_00099 | 75.0 | 100.0 / 100.0 | Complex |
TkA02G616520 | LXL04_011776 | JCVI_TKOH_00099 | 100.0 | 100.0 / 48.425 | Review |
TkA02G616530 | LXL04_011775 | JCVI_TKOH_00099 | 100.0 | 100.0 / 68.88 | Review |
TkA02G616570 | LXL04_011773 | JCVI_TKOH_00099 | 100.0 | 100.0 / 100.0 | Strict |