Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00025
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 26
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00025The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00025 |
Chr01:99646652-101237344 | Chr01:64795346-66120904 | mixed | 26 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 26 · Showing 1–26 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA01G399330 | LXL04_003055 | JCVI_TKOH_00025 | 84.8 | 100.0 / 54.152 | Complex |
TkA01G400230 | LXL04_003055 | JCVI_TKOH_00025 | 93.1 | 100.0 / 100.0 | Complex |
TkA01G400290 | LXL04_003054 | JCVI_TKOH_00025 | 99.2 | 99.578 / 91.829 | Strict |
TkA01G400570 | LXL04_003051 | JCVI_TKOH_00025 | 100.0 | 100.0 / 100.0 | Strict |
TkA01G400580 | LXL04_003050 | JCVI_TKOH_00025 | 100.0 | 100.0 / 100.0 | Review |
TkA01G400990 | LXL04_003045 | JCVI_TKOH_00025 | 97.2 | 84.118 / 100.0 | Strict |
TkA01G401000 | LXL04_003044 | JCVI_TKOH_00025 | 95.5 | 100.0 / 100.0 | Strict |
TkA01G401760 | LXL04_003041 | JCVI_TKOH_00025 | 99.2 | 93.893 / 83.673 | Strict |
TkA01G401900 | LXL04_003038 | JCVI_TKOH_00025 | 99.8 | 93.256 / 100.0 | Complex |
TkA01G402270 | LXL04_003037 | JCVI_TKOH_00025 | 99.6 | 98.28 / 33.236 | Review |
TkA01G402300 | LXL04_003037 | JCVI_TKOH_00025 | 95.0 | 76.339 / 24.0 | Complex |
TkA01G402800 | LXL04_003034 | JCVI_TKOH_00025 | 98.0 | 98.579 / 69.987 | Review |
TkA01G402810 | LXL04_003033 | JCVI_TKOH_00025 | 99.3 | 99.608 / 98.579 | Strict |
TkA01G402820 | LXL04_003031 | JCVI_TKOH_00025 | 97.9 | 100.0 / 100.0 | Complex |
TkA01G402850 | LXL04_003030 | JCVI_TKOH_00025 | 100.0 | 100.0 / 100.0 | Strict |
TkA01G402900 | LXL04_003027 | JCVI_TKOH_00025 | 96.9 | 100.0 / 100.0 | Complex |
TkA01G403130 | LXL04_003025 | JCVI_TKOH_00025 | 99.0 | 100.0 / 100.0 | Complex |
TkA01G403270 | LXL04_003021 | JCVI_TKOH_00025 | 81.7 | 100.0 / 93.674 | Complex |
TkA01G403380 | LXL04_003020 | JCVI_TKOH_00025 | 99.3 | 99.82 / 99.82 | Strict |
TkA01G403600 | LXL04_003018 | JCVI_TKOH_00025 | 96.6 | 100.0 / 97.101 | Complex |
TkA01G403630 | LXL04_003017 | JCVI_TKOH_00025 | 98.7 | 100.0 / 100.0 | Review |
TkA01G404170 | LXL04_003017 | JCVI_TKOH_00025 | 97.0 | 100.0 / 100.0 | Complex |
TkA01G404570 | LXL04_003013 | JCVI_TKOH_00025 | 99.1 | 100.0 / 100.0 | Strict |
TkA01G404600 | LXL04_003012 | JCVI_TKOH_00025 | 99.7 | 35.644 / 24.978 | Review |
TkA01G404920 | LXL04_003009 | JCVI_TKOH_00025 | 99.4 | 100.0 / 100.0 | Review |
TkA01G405390 | LXL04_003009 | JCVI_TKOH_00025 | 99.4 | 100.0 / 100.0 | Review |