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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA06G348790
Reference: TK1151 Chr: Chr06 Coordinates: 86607675-86611049 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1144 bp · TkA06G348790|TK1151|cDNA

AAATATTTGGTTTTTCTTTGAAATTACTCATTCATGTAATCACGAATTGGATATTTGGTTGAATATTCCCAAATATTAAGCACCTTGTAATTGAGAGGCGAGATGTTGAACATGTTTTGACCGGATTTCGGTAGCGGGAAGAAAAATGACTGGTGCCGTGGGCGTTATCCAAACCCTCAATCCCTCCACATTTCCACTACCAAACGCCACAACTCCACCACTAATTTCTAGAAATAAATCAATCAAGCCGCTCTACTCAA...

CDS

Download CDS FASTA

1047 bp · TkA06G348790|TK1151|CDS

ATGACTGGTGCCGTGGGCGTTATCCAAACCCTCAATCCCTCCACATTTCCACTACCAAACGCCACAACTCCACCACTAATTTCTAGAAATAAATCAATCAAGCCGCTCTACTCAATAACAGCAGAGATTAATGAGATCAGGGTGTGCACTAACCGACCTTGCCGGCGACAAGGGTCAATGGAGACCCTTCAAGTCCTCTCAGGCATCAATCCACCCAATATCGCCGTCAATTCCAGCGGTTGTTTGGGCCGATGCGGCGC...

Protein

Download Protein FASTA

348 aa · TkA06G348790|TK1151|PROTEIN

MTGAVGVIQTLNPSTFPLPNATTPPLISRNKSIKPLYSITAEINEIRVCTNRPCRRQGSMETLQVLSGINPPNIAVNSSGCLGRCGAGPNLVLLPGATYLKHCATAARAAEIMATVTGNDLESGKTSLETLSTRKKAEIEIEKGDFAMAEILLSEAIDLNPVGGLHYIYKARSVARLGMNKAVDALGDAIEASTLAPKYPEAYTCKGDALMAMEQFEAAGDSYSMALELDPSISRSKSFKIITPPKCPSSYEKRKKRNKV...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA06G348790
TK1151 IDTkA06G348790
OH-1004 IDLXL04_023377
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)87.900
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA06G348790
LocationChr06:86607675-86611049 (+)
DescriptionSimilar to HOP3: Hsp70-Hsp90 organizing protein 3
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_023377 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006620 post-translational protein targeting to endoplasmic reticulum membrane Biological Process
GO:0006986 response to unfolded protein Biological Process
GO:0009408 response to heat Biological Process
GO:0009611 response to wounding Biological Process
GO:0010286 heat acclimation Biological Process
GO:0034605 cellular response to heat Biological Process
GO:0046686 response to cadmium ion Biological Process
GO:0051131 chaperone-mediated protein complex assembly Biological Process
GO:0051260 protein homooligomerization Biological Process
GO:0051291 protein heterooligomerization Biological Process
GO:0070417 cellular response to cold Biological Process
GO:0005576 extracellular region Cellular Component
KEGG gene cross-reference
ath:AT1G12270
ath:AT1G62740
ath:AT4G12400
gmx:547932
hsa:54557
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Plastid0.963
Rank 1 · TkA06G348790 · TK1151
Mitochondrion0.041
Rank 2 · TkA06G348790 · TK1151
Nucleus0.028
Rank 3 · TkA06G348790 · TK1151
Cytoplasm0.027
Rank 4 · TkA06G348790 · TK1151
Cell membrane0.018
Rank 5 · TkA06G348790 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF012572Fe-2S_thioredx45-114 aa
PF09976TPR_21126-228 aa
PF25575TPR_BSK1_C129-203 aa
PF13424TPR_12134-180 aa
PF13181TPR_8136-161 aa
PF13432TPR_16136-178 aa
PF13428TPR_14136-161 aa
PF07719TPR_2137-161 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA06G348790PF012572Fe-2S_thioredx451140.06613.8
TkA06G348790PF09976TPR_211262280.0005820.4
TkA06G348790PF25575TPR_BSK1_C1292030.000221.9
TkA06G348790PF13424TPR_121341800.01216.5
TkA06G348790PF13181TPR_81361612.7e-0524.7
TkA06G348790PF13432TPR_161361780.00518.0
TkA06G348790PF13428TPR_141361610.03515.5
TkA06G348790PF07719TPR_21371614.7e-0730.1
TkA06G348790PF14559TPR_191371590.2312.5
TkA06G348790PF00515TPR_11401613.3e-0833.7
TkA06G348790PF13414TPR_111411610.0002821.2
TkA06G348790PF13431TPR_171531720.07814.0
TkA06G348790PF07719TPR_21811904.7e-0730.1
TkA06G348790PF13432TPR_161812320.00518.0
TkA06G348790PF14559TPR_191812310.2312.5
TkA06G348790PF13414TPR_111912120.0002821.2

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

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