ID Crosswalk
Original TK1151 gene IDs are linked to OH-1004 gene-level counterparts. TK1151 and OH-1004 are different Taraxacum kok-saghyz materials, not two releases of the same cultivar. Complete crosswalk coverage does not mean every relationship is one-to-one; complex mappings require review of their category and evidence.
Version Sources
| Version | Assembly / Annotation Accession | Source Database | Publication | DOI / PMID | Download Date |
|---|---|---|---|---|---|
| TK1151 Taraxacum kok-saghyz |
GWHBCHF00000000 GWHBCHF00000000 GFF/RNA/CDS/Protein |
NGDC Genome Warehouse (GWH) |
Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum Tao Lin, Xia Xu, Huilong Du, Xiuli Fan, Qingwen Chen, et al.; Science China Life Sciences; 2022 |
10.1007/s11427-021-2033-2 PMID: 34939160 |
2026-08-14 |
| OH-1004 / OSU_TarKok_2.0 Taraxacum kok-saghyz |
GCA_047496595.1 GCA_047496595.1_OSU_TarKok_2.0 GenBank GFF |
NCBI Assembly / NGDC integrated NCBI Assembly |
no linked publication found in NCBI/NGDC assembly records as of 2026-08-17 not available |
not available | 2026-08-14 |
Complete Gene ID Crosswalk
TK1151 reference: 45224 genes; 5 rows in the current filter. Showing page 1 / 1.
All
Strict 1:1: 6347
Probable 1:1: 1703
One-to-many: 826
Many-to-one: 24458
Unmapped: 2782
Annotation conflict: 9108
Strict 1:1 requires RBH, high identity, query/target coverage, CDS support, and JCVI synteny. Probable 1:1 still requires RBH and coverage thresholds. Low-coverage, multi-hit, split/merged annotation, and unplaced-sequence cases are excluded from 1:1 conversion. Protein and CDS coverage each use the actual sequence span of the best-scoring single HSP divided by the corresponding representative sequence length; query is TK1151 and target is OH-1004. Protein, CDS, and transcript isoforms are not shown here.
| TK1151 Gene ID | OH-1004 Gene ID | Category | Relationship / confidence | Identity / coverage | Synteny block | Description |
|---|---|---|---|---|---|---|
|
TkA05G456640
Chr05:114395131-114407113 (-)
GWHBCHF00000006
|
LXL04_022441
Chr04:150383399-150394367 (-)
CM104802.1
|
Annotation conflict | Sequence-supported with annotation/model conflict Review |
99.600 Q 100.000 / T 37.168 |
TkA05G456640 | |
|
TkA05G468590
Chr05:117376535-117378770 (+)
GWHBCHF00000006
|
LXL04_022441
Chr04:150383399-150394367 (-)
CM104802.1
|
Many-to-one | non reciprocal best hit Complex |
67.500 Q 98.586 / T 21.436 |
JCVI_TKOH_00246 | TkA05G468590 |
|
TkA05G468730
Chr05:117414440-117416882 (-)
GWHBCHF00000006
|
LXL04_022441
Chr04:150383399-150394367 (-)
CM104802.1
|
Annotation conflict | Sequence-supported with annotation/model conflict Review |
98.100 Q 95.385 / T 10.161 |
JCVI_TKOH_00246 | TkA05G468730 |
|
TkA06G108740
Chr06:28631277-28635974 (+)
GWHBCHF00000007
|
LXL04_022441
Chr04:150383399-150394367 (-)
CM104802.1
|
Many-to-one | non reciprocal best hit Complex |
38.600 Q 96.415 / T 32.219 |
TkA06G108740 | |
|
TkA08G304480
Chr08:78875863-78876666 (+)
GWHBCHF00000009
|
LXL04_022441
Chr04:150383399-150394367 (-)
CM104802.1
|
Many-to-one | non reciprocal best hit Complex |
78.100 Q 91.189 / T 8.096 |
TkA08G304480 |
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