ID Crosswalk
Original TK1151 gene IDs are linked to OH-1004 gene-level counterparts. TK1151 and OH-1004 are different Taraxacum kok-saghyz materials, not two releases of the same cultivar. Complete crosswalk coverage does not mean every relationship is one-to-one; complex mappings require review of their category and evidence.
Version Sources
| Version | Assembly / Annotation Accession | Source Database | Publication | DOI / PMID | Download Date |
|---|---|---|---|---|---|
| TK1151 Taraxacum kok-saghyz |
GWHBCHF00000000 GWHBCHF00000000 GFF/RNA/CDS/Protein |
NGDC Genome Warehouse (GWH) |
Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum Tao Lin, Xia Xu, Huilong Du, Xiuli Fan, Qingwen Chen, et al.; Science China Life Sciences; 2022 |
10.1007/s11427-021-2033-2 PMID: 34939160 |
2026-08-14 |
| OH-1004 / OSU_TarKok_2.0 Taraxacum kok-saghyz |
GCA_047496595.1 GCA_047496595.1_OSU_TarKok_2.0 GenBank GFF |
NCBI Assembly / NGDC integrated NCBI Assembly |
no linked publication found in NCBI/NGDC assembly records as of 2026-08-17 not available |
not available | 2026-08-14 |
Complete Gene ID Crosswalk
TK1151 reference: 45224 genes; 8 rows in the current filter. Showing page 1 / 1.
All
Strict 1:1: 6347
Probable 1:1: 1703
One-to-many: 826
Many-to-one: 24458
Unmapped: 2782
Annotation conflict: 9108
Strict 1:1 requires RBH, high identity, query/target coverage, CDS support, and JCVI synteny. Probable 1:1 still requires RBH and coverage thresholds. Low-coverage, multi-hit, split/merged annotation, and unplaced-sequence cases are excluded from 1:1 conversion. Protein and CDS coverage each use the actual sequence span of the best-scoring single HSP divided by the corresponding representative sequence length; query is TK1151 and target is OH-1004. Protein, CDS, and transcript isoforms are not shown here.
| TK1151 Gene ID | OH-1004 Gene ID | Category | Relationship / confidence | Identity / coverage | Synteny block | Description |
|---|---|---|---|---|---|---|
|
TkA01G027280
Chr01:7029358-7042617 (-)
GWHBCHF00000002
|
LXL04_005653
Chr01:170154219-170169143 (+)
CM104799.1
|
Annotation conflict | RBH but below probable coverage or synteny threshold Review |
81.200 Q 100.000 / T 90.560 |
JCVI_TKOH_00002 | TkA01G027280 |
|
TkA01G470040
Chr01:117645304-117646883 (+)
GWHBCHF00000002
|
LXL04_005653
Chr01:170154219-170169143 (+)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
46.900 Q 51.026 / T 25.040 |
TkA01G470040 | |
|
TkA02G503910
Chr02:129240026-129241475 (+)
GWHBCHF00000003
|
LXL04_005653
Chr01:170154219-170169143 (+)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
84.300 Q 47.783 / T 16.320 |
TkA02G503910 | |
|
TkA03G486240
Chr03:121701949-121703367 (+)
GWHBCHF00000004
|
LXL04_005653
Chr01:170154219-170169143 (+)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
87.700 Q 55.335 / T 18.160 |
TkA03G486240 | |
|
TkA03G550310
Chr03:139284080-139284863 (+)
GWHBCHF00000004
|
LXL04_005653
Chr01:170154219-170169143 (+)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
92.900 Q 30.108 / T 4.480 |
TkA03G550310 | |
|
TkA07G114840
Chr07:29784937-29785616 (-)
GWHBCHF00000008
|
LXL04_005653
Chr01:170154219-170169143 (+)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
95.100 Q 26.452 / T 3.280 |
TkA07G114840 | |
|
TkA08G227300
Chr08:59191710-59198134 (-)
GWHBCHF00000009
|
LXL04_005653
Chr01:170154219-170169143 (+)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
80.000 Q 30.726 / T 4.320 |
TkA08G227300 | |
|
TkA08G240520
Chr08:62714782-62715327 (+)
GWHBCHF00000009
|
LXL04_005653
Chr01:170154219-170169143 (+)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
80.400 Q 41.803 / T 4.000 |
TkA08G240520 |
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